KEGG   Salvia hispanica (chia): 125196109
Entry
125196109         CDS       T09851                                 
Name
(RefSeq) WD repeat-containing protein LWD1-like isoform X1
  KO
K11805  DDB1- and CUL4-associated factor 7
Organism
shis  Salvia hispanica (chia)
Pathway
shis03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    125196109
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:shis04121]
    125196109
   03036 Chromosome and associated proteins [BR:shis03036]
    125196109
Ubiquitin system [BR:shis04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     125196109
Chromosome and associated proteins [BR:shis03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.3/1.5)
     125196109
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_1st Beta-prop_EIPR1 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_RIG_2nd WD40_Gbeta Beta-prop_Aladin WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_WDR41 Beta-prop_WDR3_2nd Beta-prop_WDR90_POC16_2nd MIOS_WD40 ANAPC4_WD40 Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 125196109
NCBI-ProteinID: XP_047950441
LinkDB
Position
6:complement(44535664..44538231)
AA seq 346 aa
MGAISDPNQDGSDEQQRRSEIYTYEAPWHIYAMNWSVRKDKKYRLAISSLLEQYPNRVEI
VQLDDSTGEIRPDLSFDHPYPPTKLIFVPDKDCQRPDLLASSSDFLRLWQISDSDSPRRV
ELKSLLNNNRNSEFSGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIEKEVVDTQLIAHDKE
VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT
IIMDSSKVVVLDIRFPTLPVVELQRHQAGVNAIAWAPHSSCHICTAGDDSQALIWDLSSM
GQPVEGGLDPILAYTAGAEIEQLQWSYSQPDWVAIAFSNKLQILRL
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgggggcaatcagcgacccaaaccaagacggctccgacgagcagcagcggcgctcggaa
atctacacgtacgaagccccatggcacatctacgccatgaactggagcgtccgcaaggac
aagaaataccgcctcgccatctccagcctcctcgagcagtaccctaaccgcgtcgaaatc
gtccagctcgacgactccaccggcgagatccgccccgacctctccttcgaccacccctac
cccccgaccaagctcatcttcgtccccgacaaggactgccagcgccccgatctcctcgcc
tcctcctccgatttcctccgcctctggcaaatctccgattccgactccccccgccgcgtc
gagctcaagagcctcctcaacaacaaccgcaacagcgaattctccggtccgttgacctcc
tttgactggaacgaagcagagccgcgccggatcgggacctccagcatcgacaccacctgc
acgatttgggacatcgagaaggaggtggtggatacgcagctaatcgcgcacgataaggag
gtctacgacatcgcgtggggcggcgttggcgttttcgcctcggtctccgccgacggctcg
gttagggttttcgatctccgcgataaggagcattcgactataatttatgagagctccgag
ccggacacgccgctggtgcggctggggtggaataagcaggatcctagatacatggcgacc
atcataatggacagcagcaaggtcgtggtgttggatattcgcttcccgacgctgccggtg
gtggagctgcagcggcatcaggccggtgtgaatgcgattgcatgggctccgcatagctcc
tgccacatttgcacggcgggggatgattcgcaggctctgatttgggacctctcgtcgatg
gggcagccggtggagggcggattggacccgattctggcttacactgccggggcggagatt
gagcagctgcagtggtcgtattcgcagcctgattgggtggcgattgcgttttcgaacaag
ctacagattttgaggttataa

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