Salvia hispanica (chia): 125196116
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Entry
125196116 CDS
T09851
Name
(RefSeq) protein transport protein Sec24-like At4g32640
KO
K14007
protein transport protein SEC24
Organism
shis
Salvia hispanica (chia)
Pathway
shis04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125196116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125196116
Membrane trafficking [BR:
shis04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
125196116
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
125196116
NCBI-ProteinID:
XP_047950449
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All DBs
Position
6:33629544..33642271
Genome browser
AA seq
1078 aa
AA seq
DB search
MAAPGGPRPGNFPPNYNPNSLSNNMQNLQINQHNQQQPNNAGATAPRPPPNATPFGQRAP
AFAGSRPGPPPPGVFPRGPVPPNAPAQTTLPPNMVSSRPAGPPPGSQPPHFASRPPPPGA
MPSSIGGPVAPSPPALGPRPGSYPSSPLTSAPSTPSQASGSGPVSNGPPPFAPGMTQSGP
PFPPAIGSMPRPLVGPPQQPAMLSSRPSSQPMQMQSSFGGPPTAVSSASGQPAPPFSGPP
QNMMPPLGSSPFSAPNTGMHQSINSPYGMQTWPAQPQQGAPPPPGSMQQPPRMFGMPPGL
SLPNQAMAMSHSGQAKIDPNQIPRLAPSASAIVHETRQGNQANPPPPATSDYIVKDTGNC
SPRYMRCTINQVPLTVDLLSTSGMQLSLLVQPLALAHPSEEPIHVVDFGESGPVRCSRCK
GYINPFVKFIDQGRRFICNLCGFTDETPRDYHCNLGPDGRRRDADERPELCRGTVEFVAT
KEYMVRDPMPAVYFFLIDVSMNATQTGATAAACSAIKQVIADLPKGPRTMVGIATFDSTI
QFYNLKRSSQQPLMLIVPDVQDVYTPLESDVIVQFSECCEHLEMLLDNIPTMFESNRIAD
SALGAAVKAAFLAMKSTGGKLLVFQSVLPSCGIGSLSAREAEGRSNMSAGEKEAHKLLQP
SDKTLKTMAMEFAEYQVCVDLFITSQMYVDIASLCVIPRTTGGQVYYYYPFSARSDPAKL
YNDLRWNITRPQGFEAVMRVRCSQGIQVQEYSGNFCKRIPTDVDLPAIDCDKTIMVSLNH
DDKLQEGSECSFQCALLYTTVHGQRRIRVSTLSLPCTNMLSNLFRSADLDTQFACITKQA
AIEIPSAPLAQVRDQATNVCINILYSYRKFCATVSSSGQLILPEALKMLPLYTLALLKCI
GLRSDGRIDDRSVWINYVSPLPTPLVIPLVYPRMIALHDLNEKELDDSIIPVPIPLSSEH
IAIDGIYLLENGVDCLIYVGEDVQPKILQQMFGISSTEEIPNQFILQQYDNPLSKKLNDI
VNEIRHQRCSYLRLRLCKKGDPTGMMFFSYLVEDKMANGFSYVEYLIHIHRQIQNKMA
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcctgggggacctaggccagggaatttccccccgaattataacccgaattcc
ctttctaataatatgcaaaacctacaaattaatcagcataatcagcaacaaccgaacaat
gctggtgctactgcccctagacctcctccgaatgccacaccattcggccaacgggctcca
gcttttgctggtagtagaccaggcccccctccccctggtgtgtttccgaggggcccggta
ccgcccaatgctcctgctcaaactacactgcctccaaatatggtttcttctagacctgct
ggtccaccacctgggtctcagccgcctcactttgcatcaagaccaccaccacctggggca
atgccatcatccattggtggacctgttgctccctcacctcctgcattggggcctcgtcct
ggatcatatccatcttcccctctgacatcagctccctccactccttcccaagcaagtggt
tctggtccagttagtaatggaccgcctccatttgcaccggggatgacacaaagtgggcca
ccgttccctcctgctataggtagtatgccaaggccattagttggacctccacaacaacca
gcaatgttatcatctaggccttcttctcagccaatgcaaatgcaatctagttttggcggt
ccacctactgctgtatcatctgcctctgggcaacctgcaccgccattttcaggcccacca
cagaatatgatgccccctctgggttcatccccattttcagccccaaatacaggcatgcat
caatctataaattctccttatgggatgcagacatggccagcacagccacaacagggggca
ccacctcctcccgggtctatgcagcagcctccacggatgtttggaatgccaccaggacta
tctcttccaaatcaagctatggctatgagccattcaggccaagctaaaattgatccgaac
cagattccccgtcttgctccaagtgcttctgcaattgttcatgagacccgtcagggcaat
caggcaaaccctcccccgcctgcaacaagtgactatatagttaaagacactggaaattgc
agtccacgctacatgaggtgtactatcaatcaggttcctttgactgtggaccttctatct
acatctggaatgcagctgtctctattggtccagcctttagctcttgcacatccatctgaa
gagcctatccatgttgtagattttggggaaagtggtcctgttcgatgttctcgttgcaaa
ggttacattaatcctttcgtgaagtttattgaccaaggaagacgtttcatttgtaacctg
tgtggatttacggatgaaactccacgtgactatcactgcaacttaggtccagatggccgg
cgtagagatgctgacgaaaggcctgaactatgccgaggaacagttgaatttgttgctact
aaggagtacatggttcgtgacccaatgcctgctgtatatttcttccttattgatgtatct
atgaacgctacacaaactggtgcaactgcagcagcttgcagtgccatcaaacaagtgata
gccgatcttccaaagggtcctcgtacaatggtgggcattgctacattcgattccacaatc
cagttttacaacctaaaacgatcctcacagcagccattgatgctcattgttcctgatgtt
caagatgtctatactccactggaaagtgatgtcattgttcaattttctgagtgctgtgag
catttagaaatgttgcttgacaacattcctacaatgttcgagagcaatagaattgctgat
tcagctcttggcgctgctgtaaaggctgcttttctggcaatgaaaagcactggtggcaaa
cttttagttttccagtcagttttgccgtcgtgtggcatcggatccctttctgctcgagag
gctgaaggcagaagcaacatgtcggcaggagaaaaggaggctcacaaattgcttcagcct
tctgacaagactctaaaaactatggcaatggaatttgcagagtaccaggtctgtgttgac
ttgtttattacatcgcaaatgtatgtggatattgcttctctctgtgttattccaaggaca
actggaggccaggtatactattattatcctttctctgcccgttctgatcctgctaagctg
tacaatgatcttcggtggaacatcacaaggccccaagggtttgaggcagtgatgcgtgtt
agatgtagccagggtattcaagttcaagaatattccggaaacttctgtaagcgcatacca
actgacgttgatctacctgcgattgattgtgacaaaacaataatggtctccctgaatcat
gatgataaattacaggaaggctctgagtgttcttttcagtgtgcccttctttacaccact
gtacatggacaaagaagaatcagagtttcaacattgtccctgccttgcaccaacatgctg
agtaatctattccgctctgctgatctagacacccaatttgcgtgtatcacaaaacaagct
gctattgagattccttcagctcctcttgcacaagtcagggatcaagctactaatgtttgc
atcaacatattatactcgtaccggaagttctgtgctacagtgtcatcgtcaggacaactt
attctgcccgaggcacttaaaatgttgcctctctatacacttgctttactcaaatgcatt
ggattacgatctgatggaagaattgatgataggtccgtttggattaattatgtctcacca
ttacctactcctttggtgatcccattggtgtaccctagaatgatagcacttcacgacctt
aatgagaaggaattagatgattccattattcccgttccaattccactttccagtgagcat
attgctattgatggaatatatcttcttgagaatggagttgattgtttgatttatgtcggt
gaagatgttcagccaaagattttgcaacagatgtttggcatttcatcaactgaagagatt
ccaaatcagttcattttgcagcaatatgacaatcccttgtcaaagaagctgaatgacatt
gtaaatgagataaggcatcaacgatgttcttacctacgcttgcgattatgcaaaaagggg
gatccaacagggatgatgttcttctcgtacctggttgaagacaagatggctaatggcttc
tcatacgtcgagtatctaatacacattcaccggcagattcaaaataaaatggcttga
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