Salvia hispanica (chia): 125196130
Help
Entry
125196130 CDS
T09851
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit, cytoplasmic-like
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125196130
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shis01007
]
125196130
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shis03016
]
125196130
Enzymes [BR:
shis01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
125196130
Amino acid related enzymes [BR:
shis01007
]
Aminoacyl-tRNA synthetase
Class II (U)
125196130
Transfer RNA biogenesis [BR:
shis03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
125196130
Prokaryotic type
125196130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD1
PheRS_DBD3
tRNA-synt_2
tRNA_synthFbeta
tRNA-synt_2b
Motif
Other DBs
NCBI-GeneID:
125196130
NCBI-ProteinID:
XP_047950468
LinkDB
All DBs
Position
6:10247724..10254724
Genome browser
AA seq
500 aa
AA seq
DB search
MAQEAVLGHLEHNQEIADSGVFSQEKGISHDEIVNAIKSLNGFGLVIASDIKREKWLLSE
EAQSYVKYGSAEVLLFEAVPAEGIAKAKLQEIVNSKLPVDLDDKAKSLIYDKGWAQAMKN
KWIGLADSQVSRKVEHVEDKVKDLLIQIQNGEAVGAKDIDALKRRRLISLQIWKGFSVMK
GPNYTTTRKKAATDLVRDHLQRDEWKDIEFKEYNFLAKGQPTEGGCLHPLYKVKQQIQMI
FLQMGFEEMPTNNYVESSFWNFDALFQPQQHPARDSHDTFFLKVPSTTNILPEEYVERVK
TVHESGGYGSRGYGYDWKREEANKNLLRTHTTAVSTRMLYALAQGPFTPKRYYSIDRVFR
NEAVDRTHLAEFHQIEGLICDRGLSLGHLRGVLEDFFSRIGMSKLKFKPAYNPYTEPSME
IFSYHEGLKKWVEIGNSGMFRPEMLRPMGLPEDVQVIAWGLSLERPTMILYGIDNIRDLF
GHKVDLSLTKRNPICRLGLN
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagaagccgttctaggccatctagagcacaaccaggagatagcagattccggt
gtattctcccaggagaaagggatctctcatgatgagatcgtcaacgccatcaaaagtctc
aacggcttcggtctcgttattgcttcggatataaagagggaaaaatggctgctctcggag
gaggctcagagttatgttaaatatggatctgctgaagtgttactttttgaagccgtacca
gcagagggtattgcaaaagctaagttgcaggaaatcgtgaactcaaaattgcctgtggat
cttgatgacaaagctaagtcactgatttatgacaaagggtgggctcaagccatgaagaac
aaatggataggtctggcagattctcaagtatcacggaaggtcgaacatgttgaagacaaa
gtgaaagacttactaattcagattcagaatggggaggctgttggtgctaaggatattgat
gctctcaagcgaagaaggcttattagtctccagatttggaaaggcttttcggtaatgaaa
ggtcctaactatactacaacgaggaaaaaggcggctaccgatttagttcgtgatcatcta
cagagggatgaatggaaggatattgagttcaaagagtacaacttccttgcaaagggtcaa
cctactgaaggtggctgtctccatccgttatacaaggttaagcaacaaattcagatgata
tttctccaaatgggatttgaagagatgccaacaaacaattatgtggagagcagcttctgg
aactttgacgcacttttccagcctcaacaacatccggctcgtgattcacatgatacattc
tttctgaaagtgccttcaaccacaaatattcttcctgaagaatatgtagagcgagttaaa
acagttcatgaatctggtggctatgggtcccgtgggtatgggtatgattggaagagagag
gaggcaaacaagaatcttctgcggactcacacaactgctgtttccaccaggatgctgtat
gcacttgcccagggaccttttactccaaaaagatattattctattgaccgtgttttcaga
aatgaagctgtagatcgaactcatcttgctgaattccaccagatagaaggcttaatttgc
gaccgtgggctttctcttggacacttgaggggagttcttgaagacttcttctctcggatt
gggatgtctaagcttaagttcaaacctgcctacaatccttatactgaaccaagcatggaa
atcttcagttatcacgaaggtctgaagaaatgggttgaaattggcaactctgggatgttt
agaccagaaatgttgcggccaatgggacttcctgaagatgtgcaggtgatcgcatggggt
ctttcactcgagaggccaacgatgatcctgtacggaattgacaacatcagagatctcttt
ggccacaaggtggatctctctctcactaaaagaaacccgatatgtcgccttggacttaat
tga
DBGET
integrated database retrieval system
