Salvia hispanica (chia): 125196274
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Entry
125196274 CDS
T09851
Name
(RefSeq) 26S rRNA (cytosine-C(5))-methyltransferase NOP2B-like
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shis03009
]
125196274
Enzymes [BR:
shis01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
125196274
Ribosome biogenesis [BR:
shis03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
125196274
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
TRM5-TYW2_MTfase
Methyltransf_31
FtsJ
Motif
Other DBs
NCBI-GeneID:
125196274
NCBI-ProteinID:
XP_047950681
LinkDB
All DBs
Position
6:17810840..17816404
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AA seq
614 aa
AA seq
DB search
MAGPKLNKKKGGRAANPPPKKQKALPTLEKETKEDMIFDSDGSEEPVMLENSDEEDQGMD
SLSDMSSDGDDVYANDILQGSDDEEGSDEEERGAQGDSDSDVSDFEKEAREIDEEKAREQ
VDAEAELELNIKNEANEFALPTEEELEEEAQRPPDLSNLLRRIKEIVRVLSNFKSLRQEG
ATRKDYVDQLKMDLISYYGYNDFLIEALVELFPAVELMELIEAFEKPRPTCLRTNTLKTR
RRDLAGVLLNRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGHYMLQGASSFLPVMAL
APQEKEKVVDMAAAPGGKTTYIAALMKNTGMIYANEMKESRLKSLTANIHRMGVTNTIVS
NYDARELPKVLGSNSVDRILLDAPCSGTGVISKDESVKTSKSALDIQNCAHLQKQLILAA
IDLVDANSKSGGYIVYSTCSIMVAENEAVIDYALKKRDVKLVPCGLDFGRPGFIRFRGHR
FHTSLDKTRRFYPHVHNMDGFFVAKLKKMSNTKQTSQQSEDGEVEEDESELVESNDQEEG
DKEKKQFNKGSNEIATEKVIKEKKQLNKSSSVNGAGKQPPLKEKRKKKEWPSREEIAKNR
EEKRQALRESKRKR
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggctggtccaaaactcaacaagaagaagggtggtagagcggctaatcctccaccgaag
aagcaaaaggcattgcctactttagaaaaagaaactaaggaggacatgatatttgattct
gatggctctgaagagcccgtaatgcttgagaactcagatgaggaagatcagggaatggac
tctctctcggatatgtcgtcagatggtgatgatgtctatgccaatgatatcctccaagga
agtgatgatgaagaggggagcgatgaagaagagcggggagcacagggagactcagattct
gatgtatctgattttgagaaggaagcaagagaaattgatgaggaaaaggcacgggaacaa
gtagacgcagaagcagaattagagctcaacataaaaaatgaagctaatgagtttgcttta
ccaactgaggaggagcttgaagaggaagcacagagacccccagatttgtccaatcttcta
agaaggataaaagagattgtacgagtgctttcgaatttcaaatctttgaggcaagagggt
gctacacgtaaagattatgttgatcagttgaaaatggatttaatttcttactatggatac
aatgattttttgattgaagctctagttgagttgtttccggctgttgaactcatggaactc
attgaagcttttgagaagcctaggcctacctgtcttcgtactaacactttaaagactcgg
cgaagggacttggcaggtgttcttttaaacagaggagtcaacctcgatccattaagcaaa
tggtccaaagtaggattagttgtgtatgattcccaagttccaattggggccactccagaa
tacatggctgggcattatatgcttcaaggtgcaagctcttttttgcctgtaatggcgctt
gctcctcaggagaaagagaaagttgttgacatggcggctgcacctggtggtaaaactact
tacattgcagctctgatgaaaaatactggtatgatctatgcaaatgagatgaaggagtcg
agactcaaatcactcactgcaaatatacatcggatgggtgtaacaaacaccatagtttcc
aactatgatgcgagggagttgcctaaagtcctgggaagcaactctgtcgataggatttta
ttggatgctccttgcagtgggactggtgttatatctaaggatgagtctgtgaaaacctca
aaaagtgctttagacatacaaaattgtgctcatctacaaaagcaattaatacttgctgcg
atagatcttgtagatgccaactcaaagtcaggaggttacattgtttactccacatgttcc
attatggttgctgagaatgaagcagtcattgattatgcactcaagaagagggatgttaaa
cttgttccatgtggccttgattttggacgtcctggattcattcgcttcagagggcatcgt
tttcacacttccttggacaagacaaggcgcttttatccccatgtccacaatatggacgga
ttctttgtagccaagctaaagaaaatgagtaacacgaagcaaacgtctcaacagtcagaa
gacggagaggtggaggaggatgaatctgagttggttgaaagcaatgaccaggaagagggt
gacaaagagaagaaacaattcaacaaaggctctaatgaaattgctacagaaaaagttatc
aaagagaagaaacaattgaacaaaagctctagtgtaaatggggcagggaaacaaccacct
ttgaaggaaaagagaaagaaaaaggaatggccttcaagagaggaaattgcgaaaaacaga
gaagagaaacggcaggctttaagggaatcaaagagaaaaaggtga
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