Salvia hispanica (chia): 125196392
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Entry
125196392 CDS
T09851
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00040
Pentose and glucuronate interconversions
shis01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125196392
Enzymes [BR:
shis01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
125196392
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
125196392
NCBI-ProteinID:
XP_047950843
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Position
6:31834863..31836833
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AA seq
447 aa
AA seq
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MREIKIYPWMLMVFFGFGWMLEMVNGNIGEWDEVWKKRSEESWNRTLETYEPVPEHIVSH
LNVHAKKAVKEVEEINAKENSTRRELLKGYTGPCMATNPIDRCWRCRPRWAKKRFRLADC
VLGFGYKTTGGKNGTIYVVTDHTDHDMINPRPGTLRHAVIQKEPLWIIFERNMLIVLQQE
LIMQGDKTIDGRGVRVDIAYGSGITIQFVSNVIIHGIRIHDILSKSGGMIRDSVDHYGFR
TVSDGDGINIFGSQNIWIDHVSMKNCTDGLIDAIEGSTGISITNSHFTDHDEALLFGAND
VATYDDKMQVTVAFNHFGKRMVQRMPRCRFGYFHVVNNDYTHWKMYAIGGSSHPTIISQG
NRFVADHPFAKQVTKREKSPESEWMTWTWISEGDLFLRGAYFIESGDKDWTKKHPEVYDK
ILAAPGIHAADITRFAGALNCVVGEPC
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaataaagatatatccatggatgttaatggtgttttttggctttggttggatg
ttagaaatggttaatggtaatattggagaatgggatgaggtatggaagaagcgatccgag
gagtcatggaatcgaacacttgagacttatgaacccgtccctgaacacatagttagtcat
ttgaatgttcatgccaaaaaggcagtaaaagaagtggaagaaataaatgcaaaggaaaat
agcactcgaagggagctactaaagggctacacgggtccgtgcatggcgacaaacccaatc
gaccgttgctggagatgtcggcctaggtgggcgaagaagcggtttaggttggcagactgc
gtgttaggatttggatacaagaccacaggcggcaagaatggcaccatctatgtggtgacg
gaccataccgaccacgacatgataaaccctaggccgggaaccctccggcacgctgtaatc
caaaaggagccgctgtggatcattttcgagcgcaacatgctcatcgtcctccagcaggag
ctgatcatgcagggcgacaagactattgacgggcgtggcgtccgagtcgacattgcctat
ggctccggcatcaccatccagttcgtcagcaacgtcatcatccacggcataagaatccac
gacatcttaagcaagagcggcggcatgattagagactctgtcgaccattacggcttccgc
actgtcagcgatggcgacggcatcaacatctttgggtcacagaatatctggatcgatcat
gtctcaatgaagaattgcaccgatggccttattgacgccatcgagggatccacgggcatc
agcatcaccaacagccacttcactgatcacgatgaggcattgctctttggtgcgaatgat
gtagctacttatgatgataaaatgcaagttacggtagctttcaaccattttggcaaaaga
atggtacagagaatgccgaggtgcagatttggttattttcatgttgttaacaatgactat
actcattggaaaatgtatgccattggtggaagcagtcatcccaccatcattagccaggga
aacagatttgttgccgatcacccttttgccaagcaggtgacaaaaagggagaaatctcca
gaatcagagtggatgacatggacatggatatcagaaggagacctatttttaagaggggcg
tactttatcgaatcaggagataaagattggactaagaagcatcctgaagtttatgacaag
attctggcagctccaggtatacatgcagcagatattactagatttgcaggtgcacttaat
tgtgttgtaggagaaccctgttaa
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