Salvia hispanica (chia): 125196423
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Entry
125196423 CDS
T09851
Name
(RefSeq) splicing factor YJU2-like
KO
K28527
splicing factor YJU2
Organism
shis
Salvia hispanica (chia)
Pathway
shis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125196423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shis03041
]
125196423
Spliceosome [BR:
shis03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125196423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Saf4_Yju2
Benyvirus_14KDa
DUF6988
Ribosomal_L22
Motif
Other DBs
NCBI-GeneID:
125196423
NCBI-ProteinID:
XP_047950893
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All DBs
Position
6:complement(34012062..34015456)
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AA seq
337 aa
AA seq
DB search
MGERKVLNKYYPPDFDPAKIPRRRQPKNQQMKVRMMLPMSIRCGTCGNYIYKGTKFNSRK
EDVVGDTYLGIQIFRFYFKCTKCSAEITFKTDPQNSDYIVESGASRNFEPWRAEDEETEE
EKKKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSVDAMLEALQRSN
EKKERKLLEEEEAYIKAVFQGQKKAPIVRRIDDEDIDDDDDEDLEFFPLDDVGSSSHPSK
RTKVSDENPSMPTDILTENNGGSEGANIQGKAGVDGASASSKPVSKTPSIKFSIIKKSVP
QSSTIGVEKGQQDAKPSAATSNVLQSLFQQYGSDEDE
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgggagaacggaaggttctcaacaagtactaccccccggacttcgatccggccaagatt
cctcggcgccgccagccgaagaatcagcagatgaaggtgcgtatgatgcttccgatgagc
atccgttgcggcacctgcgggaattacatttacaagggtaccaaattcaattcccgcaaa
gaagacgtcgtcggagatacctacctggggatccaaatatttaggttttatttcaagtgc
actaagtgctcggctgaaataaccttcaagacagatcctcagaactcggattacattgtt
gaatccggagcgtcgaggaatttcgagccttggcgcgccgaggatgaagaaacggaggaa
gaaaagaagaagaggaatgctgaagagatgggagatgccatgaagtctttggagaatcga
acattagactcaaagagagagatggatatccttgctgctctggatgaaatgaaatcgatg
aagtcgcggcatgcaactgtgagtgtagatgcaatgctggaagctctgcagcgctccaat
gagaaaaaggaaaggaagctgttagaagaagaagaagcttacataaaagcagtgtttcag
ggtcaaaaaaaggctcctattgttcgaaggatcgatgacgaagatatagatgatgatgac
gacgaagatttggagtttttccctcttgacgatgtgggatcttcatctcatccatcgaag
aggacaaaggtgtctgatgaaaatccttccatgccaacagatattttgacagagaacaac
ggtggcagcgagggtgccaacattcaaggtaaagctggtgttgatggggcttctgctagt
agtaaacctgtttcgaagacgccttcaatcaaattctcaatcatcaagaaatccgtgcca
caatcctcaaccataggcgtggagaaaggacagcaagatgccaaaccctccgctgctacc
agcaacgtattacaatccttatttcaacagtatggaagcgatgaagacgagtaa
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