Salvia hispanica (chia): 125196573
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Entry
125196573 CDS
T09851
Name
(RefSeq) uncharacterized protein LOC125196573
KO
K20523
SH3 domain-containing YSC84-like protein 1
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125196573
Membrane trafficking [BR:
shis04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
125196573
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ysc84
FYVE
FYVE_2
Motif
Other DBs
NCBI-GeneID:
125196573
NCBI-ProteinID:
XP_047951099
LinkDB
All DBs
Position
6:2292630..2295940
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AA seq
474 aa
AA seq
DB search
MASEGKVSYASLSNMEKANTKFSYVDDFDDTPWPPQEGHNAEVLNHKVSYPNPLDSDDFM
DRGYDSGEDQYPPVSRNGPPEVNLKNVMGGIFAILTGRNKDHSAVRGLPQLPSSNVSFLG
SAKDGETVLHSSVYIPSAPPLLEQNAFNYNAYKDVLEAEPPEWLPDSSTTVCMQCTAPFT
ALTRGRHHCRFCGGIFCRVCSKGRCLLPAKFRERNPQRVCDTCYDRLDPLQAVLINTISN
ASQVAKHDVMDWTCSRGWLNLPVGLSMEHEIYKSTNTLRNFSQVARLNPEKSIPAAVLKG
ARGLAILTVAKAGVLLSYKLGTGLVVARRSDGSWSAPSAILSAGLGWGAQVGGELMDFII
VLHNTKAVKTFCSRMHFSLGAGCSAAAGPIGRVVEADLRAGDKGSGMCYTYSCSKGAFVG
VSLEGNAVATRMDANLHFYGDPYLTTADILLGSVDRPKAAEPLYAALRDLYSKL
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagaggggaaagtttcgtatgcgtccctgtctaatatggaaaaggcgaatacc
aagttttcttatgtagatgattttgatgacactccctggccaccgcaagaaggccataat
gcggaggtgttgaatcataaagtgtcatatccaaatccgcttgattctgatgattttatg
gatcgaggttatgactcgggtgaggatcagtacccaccggtgtcgagaaatggcccacct
gaggtgaacttgaaaaatgttatgggtgggatatttgccattcttactggacggaataaa
gatcattctgctgtaagaggtctccctcagttgccaagttctaatgtatcattccttgga
tctgcaaaggatggagaaacagtcttgcattcttcagtttacattccgagtgctccccca
cttcttgagcagaatgctttcaattataatgcttacaaagatgtcctggaggctgaacca
ccggaatggcttccagacagctcgacaacagtttgcatgcaatgcactgctccctttaca
gctttgactcgtggtagacaccattgtcgcttttgtggaggcatcttttgtagggtgtgc
tcaaaagggaggtgtttattgcctgccaagtttagggaaaggaatccgcagagggtgtgt
gacacttgctatgataggcttgatccattgcaagctgtattgatcaataccatcagcaat
gcttcccaggttgcaaagcatgatgtgatggattggacttgctcgagagggtggttaaat
cttcctgtggggttgtccatggagcatgaaatatacaagtcgaccaatacattgaggaac
ttttcgcaggtggctaggttgaacccggagaagtccatccctgcggctgttttgaaagga
gcaagaggattggcaatcttaacagttgctaaagctggtgtgttactttcttataaactt
gggactggcttggttgttgcccggcgatcagatgggtcatggtcggcaccatctgccatt
ctctctgctggtttgggatggggtgcacaggtcgggggtgaactcatggatttcataatt
gtgctgcacaacaccaaagctgtgaaaacattttgcagtcgcatgcatttttctcttggt
gctggttgcagtgctgctgctggaccaattgggagagttgttgaggcagatctacgagct
ggagataaagggtccggcatgtgctatacttacagttgtagtaaaggtgcatttgtgggg
gtctcgctcgaagggaacgctgttgcaacaagaatggacgcaaaccttcatttctacggc
gatccatacctaaccacagctgatatccttcttggaagtgtggataggccaaaggctgca
gaaccattgtatgctgctctcagagacctttactccaagctgtga
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