Salvia hispanica (chia): 125196615
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Entry
125196615 CDS
T09851
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
125196615
Enzymes [BR:
shis01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
125196615
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
125196615
NCBI-ProteinID:
XP_047951165
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Position
1:complement(40586309..40589645)
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AA seq
658 aa
AA seq
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MEKMGRRRSTARCLVIILSFFFLLITKNHAHRSSPPVKLHVTEQHVEIDNSIVKITLSNP
GGMITSLGYENVNNVLEYRLEEGRRGYYDIMWRRPDRNESNLDTLDCTSFRVVAATDDQV
EVSFTKTWHHFLDGKVPLNIDKRYIVLRGSSGFYSYAILKHRAGWPDLNIGEARIVFKLR
QDMFRYMVISDDKQRVMPTSMDREGCHNLDYKEAVLLTNSSNPLLRGEVDDKYQYSCDNK
DNRVHGWISSKPHIGFWVITPSDEFRAGGPIKQDLTSHATSTSLAIFFSAHYAGPDFGVR
LRNGERWKKVFGPVFMYLNSDSTNNPNAIWEDAKGQAAQETKKWPYDFPLSPDFPHSNQR
GAISGRLFVNDGAITLANLAYLGLAQPGDAGSWQENTKGYQFWTQSDERGNFSIKGVRAG
TYNLYAWVPGVIGDYKHHANITIRPGSQVVIGDIVYNPPRNGPTLWEIGIPDRTAAEFYV
PDPTPHLVNRLYVNHTEKYRQYGLWNRYTDLYPLHDLIYTVGVSDYRRDWFFAHVNRRVK
GSYVATAWQVVFNVRHVKMRGIYTLRVALASANFAEIQVWVNKHKGVGPHFSTGMIGGDN
AIARHGIHGLYRLYSVNISGSQLLEGRNKIYLRQARGYLPFLGAMYDYIRLETPPHPS
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggagaagatgggtcgacgaagatcaactgcacgctgccttgttattatactgtctttc
tttttccttctaattaccaagaatcatgcacacaggtcatcacctccagtcaaactccac
gtaactgagcaacatgtggagatagataacagcattgttaaaatcacgttgtcgaatccg
ggtggcatgatcacaagcctcgggtacgaaaacgtcaacaatgtacttgaatatcgcctc
gaagaagggcgaagaggttactatgacatcatgtggaggaggccagatcgcaacgaaagt
aacttggatacgctcgactgtacgagcttcagagttgtagcagcaaccgatgatcaggtt
gaagtttcttttacaaagacatggcatcacttccttgatggaaaagtacctctcaatatt
gataagaggtatattgtcttgcgtggatcttctggtttctactcgtacgcaattttaaag
catagggcaggatggcccgatctaaacataggcgaagcaagaatcgtattcaagcttaga
caagacatgtttcgttacatggtaatatctgacgataagcaacgagtcatgccaacatca
atggatagggaaggatgccacaatcttgactacaaggaggctgttctgttaacaaattcc
agcaatcctctacttagaggagaggtggatgataagtatcagtactcgtgcgacaacaag
gacaatcgtgttcacggatggattagttcgaaacctcacattgggttttgggtgataacg
cctagtgatgagttccgagctggtggccctatcaaacaagatcttacttcacatgctacc
tccacttccctagctattttctttagcgcgcattatgctggtccagattttggagttaga
ttgcgcaatggagagcggtggaagaaggtcttcggccctgttttcatgtacctcaactcg
gattctactaataacccgaatgcaatttgggaagacgctaagggtcaggctgcacaagag
accaagaaatggccttacgatttcccattgtcaccagattttcctcattctaaccaacgt
ggtgccatctctggccgactatttgtaaacgacggtgcaatcacactagcaaatttggca
tatctgggattggctcaacctggagatgctggatcttggcaagagaacactaagggctat
caattttggacccaaagtgatgagaggggcaacttcagcatcaaaggtgttagagcaggc
acttacaatttgtacgcgtgggtgccaggtgtcattggagactacaaacaccatgctaac
attacgatccgaccaggaagccaagttgtaatcggagatattgtgtacaatcctccaaga
aatggtccgactctatgggaaattggaatccctgatcgaacagcagctgagttctacgtt
cctgatccaacccctcacctagtcaaccggctatacgttaaccacactgaaaagtatagg
caatatggtttgtggaacagatacactgacttatatcctcttcacgatctcatttacacc
gttggagtcagcgactatcgtagagactggtttttcgcccatgtaaacaggcgtgtgaag
ggaagctatgtagcaacggcatggcaagtcgtgttcaacgtgagacatgtgaaaatgaga
ggaatttacacacttcgggtagcattggcatctgccaactttgcagaaatccaagtatgg
gtgaacaagcacaagggcgttggcccacatttctcaacaggaatgattggcggagacaat
gcaattgctaggcatggcattcatggcctctacagattatacagtgtcaacatttcagga
tctcaactgttggaaggaagaaacaaaatatatcttaggcaagcacgcggatacctgcca
ttcctcggcgctatgtatgactacatccgcctcgaaaccccaccccatccctcataa
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