Salvia hispanica (chia): 125196624
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Entry
125196624 CDS
T09851
Name
(RefSeq) rhamnogalacturonate lyase-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
125196624
Enzymes [BR:
shis01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
125196624
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
125196624
NCBI-ProteinID:
XP_047951177
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Position
1:complement(40592262..40595094)
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AA seq
631 aa
AA seq
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MSRLLPVSNQEASPPVQLHVTPTHVEIDNGIVKLTLMNPGGLITSIGYNGVDNILEYVLA
EDRRGYCDIVWSRPDRSGSNFDMLFCTRFTVIVETADQVEVSFTKTWNPSLDKEVPLNVD
KRYILLRGSSGFYSYSIFEHLKGWPALNIDEARIAFKLHQDMFNYMVISDDKQRVMPTDK
DRKAGDPLAYPEAVIISHPSNPQLKGEVDDKYEYSCNNEDNHVHGWISSTNPRIGFWVVM
PGDEFRAGGPIKQDLTSHAGPTSLATFFSNHYAGDTFGVSLRNGEPWKKVFGPVFIYLNS
GPSTSAIWGDAKRQTAEEMRKWPYDFPQSPDFPGPNQRGAITGRLLVHDIVTAPAKSAYV
GLALPGVVGSWQEDTKGYQFWTRTDKNGYFSISGVRAGTYNLCAWVPGVIGDYKHPSDIT
ILPGKQVAIGEAVYSAPRNGPTLWEIGIPDRTAAEFYVPDPYPNLVNKLFINHAEKYRQY
GLWSRYTDLYPRNDLVYTVGVSDYHKDWFFAHVTRDANGQYLGTTWKIAFNVKNVMSRGT
YMLQLALASASYAEIQVGVNDRPYFTTGKIGKENVIARHGIHGLYRLFSVKILGSLLVEG
TNTIYLSQLRGGNPFFGVLYDYIRLEAPPQP
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgagcagattattaccagtgagtaatcaagaggcatcacctccggtccagctccatgta
acgcccacccatgtggagattgacaatggcattgttaaactgacattaatgaatccggga
ggcttgatcacaagcatcggatacaacggggtcgacaatattcttgagtacgtcttagct
gaagaccgaagaggatattgtgacattgtatggagcaggcccgatcgcagtggcagcaat
ttcgacatgctgttttgtacaagattcacagttatagtagaaactgctgatcaggttgag
gtttcattcacaaagacatggaatccatcccttgataaagaagtacctctcaatgtcgat
aaaaggtacattctgttgcgtggatcatcgggtttctactcttactccatattcgagcat
ttgaaaggatggcctgctctcaacattgatgaagcaagaatcgccttcaagctccaccaa
gacatgtttaattacatggtaatatcggacgacaagcagagggtcatgccaacagacaag
gacagaaaagcaggcgatccgcttgcttatccggaagctgttatcatatcacatcctagc
aatccacaactaaaaggagaggtggatgataagtatgagtactcgtgcaacaacgaggat
aaccacgtacatggctggatcagctccactaatccgcgcatcggattctgggtggtgatg
cctggtgatgaattccgagcaggcggccctatcaaacaagacctcacatcacatgccggc
cctacttccttagctacgtttttcagtaatcactatgccggtgacacctttggcgttagc
ttgcgcaatggagagccgtggaagaaggtgttcggacctgttttcatctacctcaactcg
ggtcccagcactagtgccatatggggagatgctaagagacagacagcagaagagatgagg
aaatggccatatgatttcccacaatcaccagactttcctggtcccaatcaacgcggtgca
atcaccggccgccttttggtacatgatattgtaacggcaccagcaaaatcagcctacgtc
ggattggctcttcccggagttgtaggatcttggcaagaggacactaagggctatcaattt
tggacacgaactgacaaaaacggctacttcagcatcagtggtgtcagagcaggcacatac
aacttgtgcgcgtgggtgccaggtgtcatcggggactacaaacacccctctgacataacc
atccttccaggaaaacaagttgcgataggcgaagccgtgtacagtgctccaagaaacggt
ccaactctctgggaaatcgggatccctgaccgcactgcagcagagttctacgttcccgac
ccataccctaatctcgtaaacaaactattcatcaaccacgcagaaaagtacaggcaatat
gggctgtggagcagatacacagacttgtatcctcgtaacgacctcgtttacaccgttgga
gtaagcgactatcacaaggactggtttttcgcgcatgtaaccagggatgcgaacggacaa
tacttaggaacgacatggaaaatcgcgttcaacgttaaaaacgtgatgagcagaggaacg
tacatgcttcagcttgcgttggcgtctgcgagctatgcagagatacaagtaggggtgaac
gaccggccttatttcaccacagggaagatcgggaaagagaacgtgattgcgaggcacggg
attcatgggctctacagattgttcagtgtgaaaatattaggatctcttttggtggaagga
acaaacacaatatatctcagtcagttgcgaggtggaaatccgttcttcggcgtcctctac
gattacattcgcctcgaagccccgccgcagccttga
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