Salvia hispanica (chia): 125196674
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Entry
125196674 CDS
T09851
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00040
Pentose and glucuronate interconversions
shis01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125196674
Enzymes [BR:
shis01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
125196674
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
125196674
NCBI-ProteinID:
XP_047951238
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Position
6:complement(31809091..31810917)
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AA seq
440 aa
AA seq
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MNSKLVLFIVVGWIFPVLNANTEEWDEVWTKQRDEARNRTLEAYHPHPEMIVNHLNAHVN
RVLKEIEVDDEKNLWSNGTRRHLMQSKGPCTATNPIDKCWRCQANWADNRMKLADCVLGF
GIKTTGGKGGKIHVVTDPSDDDVQNPKAGTLRHAVIQKEPLWIIFDKNMVIKLTQDLMMQ
GDKTIDGRGFKIEITQGAGLRIQNMKNVIIHGITIRNIVRTSGGLIRDSVDHVGMHSQSE
GDGITIFGSQNIWIDHVTMAKCIDGMIDATQGSNAITISNSHLTDHDKTILFGSDDDFKD
DVKMQATVAFNHFGEGLVQRLPRCRFGYFHVVNNDYTRWLMYAIGGSSNPTIISQGNRYL
AGDAKEVTKREAEESEWKNWTWVSEGDVFLGGAVFVPSGDQGWAKKHPEVYDKVAAAPGA
NVEELTKFAGVLECEVNKPC
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaaagttagttttatttattgttgttggctggatttttccagtccttaacgct
aatacagaagaatgggatgaggtatggacgaaacagagagatgaggcgcggaaccgtact
cttgaggcttaccacccacatcccgaaatgatagtcaatcatttaaatgcccacgtcaac
agagtattgaaagaaatagaagtagatgacgaaaaaaatctatggtcaaatggcacgaga
agacatctaatgcagagcaaaggtccatgtacggcgacaaacccaatcgacaaatgttgg
agatgtcaagccaattgggcagacaaccgaatgaagttggccgactgtgtgttggggttc
gggataaagacgaccgggggaaagggtggtaagattcatgtggttaccgacccttctgac
gatgacgtacaaaatcctaaagcaggaaccctacggcacgctgtgatccagaaagagcca
ttgtggatcatatttgataaaaacatggtaatcaagttgacacaagacttgatgatgcag
ggtgacaagacgatcgacggacgtgggtttaaaattgagattacgcaaggcgccggatta
agaatacaaaatatgaagaatgtgatcatccatggaatcacgattcgtaacatcgtgagg
acatcaggtggacttattagggactcagttgaccatgttgggatgcactctcagagtgaa
ggtgatggaataaccatctttggatcacaaaatatttggattgatcatgtcactatggcc
aaatgcatcgatgggatgattgatgcaacccaaggttccaatgcaatcaccatctccaac
agtcacctcaccgatcacgataagacaatcctttttggttcagacgatgatttcaaagat
gatgtgaaaatgcaagccacagtggcgttcaaccattttggggaaggattagtgcagaga
ctgccgaggtgtagatttggttatttccatgttgttaacaacgattacacacgttggtta
atgtatgccattggtgggagcagcaatcccaccattattagccaaggcaacagatacctt
gctggggacgccaaagaggtgaccaaaagggaggccgaagaatcggaatggaagaactgg
acatgggtatcggagggggacgtattcttgggaggcgcagtttttgttccatcgggagat
cagggttgggcaaagaagcatcctgaggtgtatgacaaggttgcagcagcgcccggtgct
aatgtggaagaattaactaaatttgcaggggtactggaatgcgaagtaaataaaccatgt
tag
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