Salvia hispanica (chia): 125197008
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Entry
125197008 CDS
T09851
Name
(RefSeq) E3 ubiquitin-protein ligase ATL42-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125197008
Enzymes [BR:
shis01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125197008
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
125197008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING_16
zf-RING_4
Prok-RING_4
FANCL_C
Prok-RING_1
TMEM128
zf-RING-like
SLX1_C
zf-HC5HC2H
PHD
zf-Nse
zf-C3H2C3
RH_dom
RINGv
Motif
Other DBs
NCBI-GeneID:
125197008
NCBI-ProteinID:
XP_047951655
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All DBs
Position
6:849827..850993
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AA seq
306 aa
AA seq
DB search
MKITSFLFIFIFIFVLVFVQTNAQTPSDTAHHRSTSDAISNFQPSLAVVISMLALMFSLT
LFLLLYAKLCHRPSPTTTTTLPLSAPGLDKSLISSLPFFRFSSLHGSRAGLECAVCLAKF
DDADVLRLLPKCNHAFHIACIDQWLEKNSTCPLCRRHVTADDLQNPPDSINLELYVEREE
SRHGSSRFCIDEDDEEEEAMPERMMHRLNHKIVVLKSRWSNVSSSDIMLLNSSAEGDKER
KLGFESGSRNPDEKRSMSEIVAHPRFHEEVNGSEERRRRLWLPIARKTVQWFASRETTSS
QQFRSS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcacatcattcctcttcatcttcatcttcatcttcgtcctcgtcttcgtccaa
accaacgcccaaaccccctccgacaccgcccaccaccggtccacttccgacgccatcagc
aacttccaacccagcctcgccgtcgtcatctccatgctcgccctcatgttctccctcacc
ctcttcctcctcctctacgccaagctctgccaccgcccctcccccaccaccaccaccacc
ctccccctctctgcccccggcctcgacaaatccctcatctcctccctccccttcttccgc
ttctcctccctccacggctctcgagccggcctcgaatgcgccgtctgcctcgccaaattc
gacgatgcggacgtcctccgcctcctccccaaatgcaaccacgccttccacatcgcctgc
atcgaccagtggctcgagaaaaactccacctgccccctctgccgccgccacgtcaccgcc
gacgatctacaaaatccgccggattccattaatctcgagctctacgtcgagagagaggag
agccgccatggatcctcaagattctgcattgacgaggacgacgaggaggaggaggcgatg
ccggagaggatgatgcataggttgaaccacaagatcgtggtgctgaagagccggtggagc
aacgtgagctcctccgacatcatgctcctcaactcctccgcggagggggacaaggagagg
aaattagggtttgaatcgggctcgcggaatcccgatgaaaagagatccatgtcggagatc
gtggctcatccaagattccacgaagaagtgaatgggagcgaggagaggaggagaaggctt
tggctaccgatcgcgagaaaaacagtgcagtggtttgcaagtagagagacaacatcatct
caacaattcaggtcatcatag
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