Salvia hispanica (chia): 125197049
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Entry
125197049 CDS
T09851
Name
(RefSeq) nuclear-pore anchor-like
KO
K09291
nucleoprotein TPR
Organism
shis
Salvia hispanica (chia)
Pathway
shis03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125197049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125197049
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125197049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
ATG14
Motif
Other DBs
NCBI-GeneID:
125197049
NCBI-ProteinID:
XP_047951702
LinkDB
All DBs
Position
6:complement(32419860..32438093)
Genome browser
AA seq
2066 aa
AA seq
DB search
MPLFVSDEEYRRCSHDAALLTEKADDFIRGLYNQIETVKAEADAASITLEQTCALNEQKY
VSLSAEYSSLQLQNTETSALLEQRDAEIAGLKVEKQQFLLQSIEKDGEVERLMREASELH
RSKRQLMELVEQRDLEINEKNATIKSYLDKIVNLTENLASKDARIRDIESELGRLHATSD
RFLQEKELLERHNSWLNEELTTKVNDLIQVRKEYGVYEADMSGKLADVEHKLKESANSLK
FHKDKARELEEKLASIEIELLSTKDAAAAAEQRFSAEISTITKLADLYKESSEEWSKKAG
ELEGVIKALETHLNQVETESKDKLDKEVSARKEVEKEYADLKDTLQSCQTELEKLKRGNE
LQNLPLSSFTTGLLTNSVDADEMVLDDRAIIPVVPAGVSGTALAASLLRDGWSLGKIYAK
YQEAVDALRHEQLGRKQSQAILERVLYEIEEKAGVIMDEREEHERLVEAYSALDQKLQQT
LSGHSTLQITIQELKATLKRQERDYAVAQKEIVELQQQVAVLLKECRDVQLRCGSVSPYQ
DDQLISGISVPVGTESRAENVILDRLLTFKDINGLVEQNVQLRSIVHNLSDQIEDSGAEL
KEKYEKELQMHKEETVSKVKAVLLRAEEQERMIESLHTSVAMYKRLYEEEQKLRAYPTHG
LEAVPERGGREIIPVQENSHEASRKHEHTLERLRSLEEDLAKSKNDLISLRSDRDRLETV
AMFAEEKLARFMKEFEQQREEHNGIRARNVEFSQIIVDYQRKLRESAESLDAANELSRKL
TMEVSILKQEKEMLQNSEKRASDEVCSLSERVHRLQATLDTMQSAEEVREEARGVERRKQ
EDYVNKIEREWAEAKRELQEQRDLVRSLSLEHGSSLKDAHKQIDELNKELANSLRSVANA
NSRAAIAEARYSDLEKIMESTRTKDSDGADSGPSSSSSEKMLAKFRDEIEKLREEAEASK
NHMLQYKSIAQVNEEALTQLELAHENFKKEADEVKRSLENEIHLLREHVNELESECKLKT
EEAISATSGKEEALAGALSEIASVKDAFSVKISQIVVMESQISTLKEDLESEHKKWRTAQ
DNYERQVILQSETIQELTKTSQALDSAQKEASELRKVVDVLKTENVELKSKWETEKLAIE
VYRNEADKTYTEINELNKILHSQLEALHIKLAEKEKGIASGSSSKNLGGDDGLQSVVNYL
RRSKEIAETEISLLKQEKHRLQSQLESALKSAESAQTLLQEERGKSRASLLTDEEFQSLQ
LQVREITLLRESNVQLREENRHNFEECLKLREAFQNAKIENENLEKLLRDRDRELEAYRK
EVEILKEEKMHLEKRIAELVQKCKDVDVNDYNQLKESSKQMQMSLAEKDSQLEEVKKLLL
EKQETVSILERDLARSKTEVSERENKINEVSQTEASQKSEIDKLKRYTVQARRKVENLAK
EKDEMSKEVQSLSKQLEEARQALSKQLEEAKLVKRNTVDSGGEQMLREKEKDTRIQILER
TVERQRDDLKKEKEDHHKEKQKFLKMRKTIIESHENVTQEKRRITDDLTKHKQALKALQD
EVERIKNPGGSQSESASSNILDDFASAYFLAVDNFEQLAQPAFGVPDSTTTDAPPLDNAT
SVAVPTGQAVAVSTGQAVPSSQTPEPPAASVPAARAEEKEKRPVLTKANLKMGRKLVRPN
ITKPKEPQGDVEMTEGDESNTGLPSQSVEIQGTAGAPTTASARKRMQDEMLTTEETTSDV
PAPLHKKSKAPDSLQVGGDELAAPPTKLPEAVITEESSDDMGNLQQIKEEVVEKDELDTG
EDQSVEPLADEEFSEPVDAADEKLEKPSDSMLSDDQLRDQTELDIQRIVAESGGEKEEGE
VVGDFADNDGDSSTINETGGPGNGELQGEQSTDPEKSPSIEPLGLEAGEIDTSDTLEEEK
IGDLNETITDSSDKLIHGADSSAETDRAPGSSNPPSEEASTSTTVAIVDVGSSVQPGSTP
PQDSGAKPVSPLNSGGSTPPQDSGAKPVSPLNSGATTINLQERARQRAHLRQAGMGGVTS
SPSRARGRTVRGRGVRGRTGRGQSPG
NT seq
6201 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttttcgtatcggacgaagaataccggcggtgctcgcacgatgcggcgctcttg
acggagaaagcggacgacttcatccgtggactgtacaatcaaatagagacggtgaaggcg
gaggccgacgctgcctctatcactctcgagcagacgtgcgcactcaacgaacaaaaatac
gtttccctttctgcggagtactcgtctctccagctacagaacaccgagacaagtgctttg
ctcgaacagcgcgatgctgaaattgcggggctgaaagtcgagaaacagcaatttctgctt
caatctattgaaaaggatggggaggtagagaggttgatgagggaagcatcagagcttcat
agatcgaagaggcagctgatggagttggtggaacaaagggacttggaaatcaacgagaaa
aatgctacaataaagagttatcttgataagattgttaatttgactgaaaaccttgcatca
aaagatgcacggataagggacattgaatctgaattggggcgattgcatgcaacatccgac
cgttttttgcaggagaaggagcttctcgagaggcataattcatggcttaatgaggagttg
acgactaaggttaatgatctgatccaggtccggaaggaatatggagtatatgaggctgat
atgtctggcaaacttgcggatgttgaacacaaattgaaggagagtgccaattctctaaaa
tttcacaaagacaaagcgagggagttggaggagaaacttgcatcgatcgaaatagagttg
ttgtcaactaaggatgcagcagcagcagctgagcagcgtttctcagctgaaatttcaaca
ataaccaaacttgctgatttatataaagaaagctcagaggaatggtccaagaaggcagga
gaacttgagggagtcatcaaggctcttgaaactcacttaaatcaagttgaaactgaaagt
aaagataagcttgataaagaagtgtctgcaaggaaggaagtggaaaaggaatatgctgat
ttaaaagatacgctacaaagctgccaaacagaattggagaagttaaaaagaggaaatgag
cttcaaaaccttcctctgagtagttttacaactggcttattgacaaattcagttgatgct
gatgaaatggttttggatgatcgagcaattattcctgtagttcctgccggagtttctgga
acagcattggcagcttcacttcttagggatggatggagtctggggaaaatatatgcaaaa
tatcaagaggctgttgatgctctacggcacgagcagttggggagaaagcaatcccaagct
atattggaacgcgtgctttatgaaattgaagaaaaagctggagtcatcatggatgaaaga
gaagaacatgaaagacttgtcgaggcctactctgccttagatcagaaactgcagcagaca
ctatcaggacattccactctgcagattaccattcaggagctcaaggctacgttaaagagg
caggagcgtgactatgcagttgctcagaaggagattgttgagctccagcaacaggtggct
gtactgttaaaggagtgtagagatgtccagttgcgttgtggatcagtttccccttatcaa
gatgatcagctcattagtgggatttctgtgccagtgggtactgaatctagagctgaaaac
gtcatattggaccgcctgttgaccttcaaagacataaatggattagttgaacagaatgtc
cagttgcgcagtattgtacacaatctatctgatcagattgaagatagcggagcagagtta
aaggaaaagtatgagaaggagcttcagatgcataaagaagagacagtgtctaaagttaaa
gcagtgttgctgagggcagaggaacaggagcgcatgattgagtcgcttcatacctctgtg
gccatgtacaagaggctctatgaagaggagcaaaaacttcgtgcttatcctactcacggg
cttgaagcagttccagagcgaggaggcagggagattatacccgtacaagaaaatagccat
gaggcatcaagaaagcatgaacatactttagagcgtctgagaagtctggaagaagatttg
gcaaagtccaagaatgacctcatatcattgcgatctgatcgtgatagattggaaacggta
gcaatgtttgcagaagaaaaacttgccaggtttatgaaggagtttgagcaacagagggaa
gagcataatggaattagagcaagaaatgttgagttctctcagataatagttgactaccaa
aggaaactccgtgaaagtgcagagtccttggatgctgccaatgaactgtctcgcaagttg
acaatggaggtatcaattttgaagcaagaaaaggaaatgcttcagaactctgagaaaaga
gcttctgatgaagtttgtagtttgagtgagagggttcatcgacttcaggccactttggac
accatgcagagtgcagaggaagtgcgtgaggaggctagaggtgttgagaggagaaaacaa
gaagattatgtaaacaaaattgagagagaatgggctgaggcaaaaagagaacttcaggaa
caacgggatcttgttcgaagcctttctcttgagcatgggagtagtttgaaggatgctcat
aaacaaattgatgaattgaacaaagaattggctaattctttgcgatctgtggcaaatgct
aattctagagcagcaattgcagaggctcgatattctgatctggagaagattatggaatct
acaaggacaaaggattctgatggtgctgatagtggaccttcttcttcttcttctgaaaag
atgctggccaagttcagggatgaaattgagaaattaagagaggaagcagaggcaagcaaa
aatcacatgcttcagtacaagagcatcgctcaagtaaatgaagaagccctcacacagttg
gagttggcccatgagaattttaagaaagaggctgatgaagttaagaggtcgctagaaaac
gagattcatttgctcagggagcatgttaatgaacttgagagtgaatgtaagctgaagact
gaggaagcaatttctgcaacttctgggaaagaagaggctcttgctggtgctttatctgag
attgctagtgtgaaggatgcgttttctgtaaaaatatcacagattgtagtcatggaatcc
caaatctctacattgaaagaagacttggagtcggagcataagaaatggcgaactgctcaa
gacaactatgagagacaggttattctacaatcagaaactattcaagagttgacgaaaaca
tcgcaagccttggattcggcacaaaaagaagcatctgagctccgtaaagtggtagatgtg
ctaaagacagaaaatgtggagttgaagtcaaagtgggagacagaaaagttggccattgaa
gtatataggaatgaagcagacaagacgtacactgaaattaacgaactaaacaagattttg
cacagtcaacttgaagccttgcacattaagttggctgagaaggaaaagggaatagcttct
ggaagcagttctaagaaccttgggggtgatgatgggttgcaaagtgttgtgaactatctc
cgacggtcgaaggaaatagctgaaacagaaatctcattattgaaacaagaaaagcatcgc
ttgcaatctcaattagagagtgctttgaagtcggccgagtctgcacaaacattgcttcag
gaagagcgaggaaaatcacgtgcatcattgcttacagatgaagaatttcaatctcttcaa
ctacaggtcagagagattacattactgcgtgaaagcaatgtgcaactcagagaggaaaac
cggcataattttgaagaatgcctgaaacttcgtgaagcatttcagaatgctaaaattgaa
aatgagaatttggagaagcttctaagagacagagacagagagttagaagcatatagaaaa
gaagttgaaattttgaaggaagaaaaaatgcatcttgaaaagagaattgccgagttggta
cagaagtgcaaggatgttgatgtcaatgattataatcagttgaaggaatcttctaagcag
atgcagatgagcttagcggaaaaggatagtcagctggaggaagttaagaagcttttatta
gaaaagcaggaaacagtatcaattctagagagagacctagctagaagcaaaacagaagtg
agtgaacgagagaacaagattaatgaagtctcacaaactgaagcttctcagaaatccgag
attgataaacttaagcggtatactgtgcaagcaagaaggaaggttgaaaaccttgcaaag
gaaaaagatgagatgagcaaagaggtccagtctttgtccaaacaattagaggaggctagg
caagccttgtccaaacaactggaggaggctaaacttgtaaaacgaaatactgttgattct
ggaggagaacagatgctgagagaaaaggagaaagatacgaggatacaaatcctagaaaga
acagtagagaggcaaagagatgatctgaagaaagaaaaagaagatcaccataaagaaaaa
caaaaatttctaaagatgcggaaaacaataatcgagtctcatgaaaatgtcactcaagaa
aagaggagaatcaccgacgaccttacaaagcataaacaagctttgaaagctcttcaagat
gaagtggaaagaataaagaaccctggaggcagtcaatcggaaagtgcatctagtaatata
ttggatgattttgcttctgcctatttcctggctgtagataattttgaacaattggcacag
ccagcttttggtgtccctgactctaccacgacagatgctccacctcttgataatgcaaca
tctgttgcagttcccaccggtcaagcagttgcagtgtccaccggtcaagcagtaccatcg
tctcaaacccctgaacctcctgctgccagtgttcctgcagcaagagctgaggagaaagag
aaaagacctgtgttaacaaaagcaaaccttaaaatgggaaggaagctggttcgtcctaat
attacaaagcctaaggaacctcaaggtgatgtggagatgacagaaggagatgaatctaat
actggattaccatcccagagtgtggagattcagggaactgcaggtgctcccacaacagca
tctgcacgtaaacgaatgcaagatgagatgctcactacagaagagactacctctgatgtc
ccagcaccgttgcataaaaagtcaaaagctccagatagcctacaggtgggaggtgacgaa
ctagctgctcctcccacaaagctacctgaagctgtcatcactgaagaatcatcagatgat
atgggaaaccttcagcaaattaaggaagaagttgttgaaaaggatgagcttgacactgga
gaagatcaatctgtagaaccattagcagatgaagagttcagtgaaccagttgatgctgca
gatgaaaaattggagaaaccaagcgactctatgctatctgatgatcaactgagagatcaa
accgaactagatattcaacgcatagttgcagagtcaggtggtgagaaagaagagggagag
gtggttggtgattttgctgataatgatggtgatagcagcacaatcaatgagacaggagga
ccaggaaatggagaattacaaggcgaacaatcaacggaccctgagaaatcacctagtatt
gaaccattgggcttggaagctggggagattgatacatctgatacactagaggaagagaag
ataggtgacttaaatgagaccataactgacagttctgataagcttatccatggtgcagat
tctagtgcagaaaccgatagggcacctggttcatccaatcctccctctgaggaagcatca
accagcactactgttgctattgttgatgttggatcttcggttcaacctggatcgactccc
cctcaggacagtggtgcaaaacctgtgtcacctcttaacagtggtggatcaactccccca
caggacagtggtgcaaagcctgtgtcacctctgaacagtggtgcaacaactattaatcta
caggagagagcaaggcagcgagcacacttgaggcaggctggcatgggaggggttacttct
tcaccaagcagagctcgtggccgaacagttcgtggtcgtggtgtacgtggacgcactgga
cgtgggcaatcccctggttaa
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integrated database retrieval system