Salvia hispanica (chia): 125197371
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Entry
125197371 CDS
T09851
Name
(RefSeq) amino acid transporter AVT1A
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
shis
Salvia hispanica (chia)
Pathway
shis04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
125197371
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shis02000
]
125197371
Transporters [BR:
shis02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
125197371
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Gene cluster
GFIT
Motif
Pfam:
Aa_trans
DUF6556
Motif
Other DBs
NCBI-GeneID:
125197371
NCBI-ProteinID:
XP_047952064
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Position
6:9153455..9157596
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AA seq
534 aa
AA seq
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MSNQAEDSSEYLLDDIDDAEENDNKFDAGSCSDVDDADGDADVKSSSPFTSQQWPRSYME
TADAYSISVSPSFGTLKHRSSSRYSFSEVNNNDFMQSDARRSLLSKEESVDEKYDPESIS
VAGLSLSQRASLYEQLTGELPIGRGCSFSQTIFNGVNVLAGVGLLSTPYTVREAGWSSLL
VLALFAVICCYTASLMRCCFESREGIISYPDIGEAAFGKYGRLFISIVLYAELYSYCIEF
IILEGDNITSIFPGASLQLGSLNLDSVHLFGIVSALIVLPTVWLRDLRVISVLSACGVLA
TVVIVVCLVFLGSFGGIGFDHTGELVNLKGIPFAIGVYGFCYSGHSVFPNIYQSMADKTK
FTKALIICFLICFLLYGGVAVVGYLMFGQSTLSQITLNMPPDSILSKIAIWTTIINPFTK
YALLMNPLARGIEELLPPRISDSYWFYILLRTVLVLSTVCFAFVLPFFGLVMALIGSLLS
ILVAVIMPALCFVKIMGKKATRAQVITSLSIVVFGVISATLGTYSSLAGIADNY
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaccaagctgaagattcgtcggaatacttgttggatgatattgatgacgctgaa
gagaatgacaacaagtttgatgccgggagctgcagcgatgtagacgatgccgatggtgat
gctgatgtcaaaagttcttcgcccttcacttctcagcaatggcctcgaagttatatggag
acagctgacgcttactcaatttccgtatccccaagttttggcaccttgaagcatcgttcg
agctctagatattcgttttctgaagtgaacaacaatgacttcatgcagtctgatgcaaga
agaagtttgctatcaaaagaagaatcagttgatgagaaatacgacccagagagcatctct
gtggcagggttatcattgtcacaaagggcttcattgtacgagcaacttactggagagctt
ccgatcggtcgggggtgcagcttttctcagactatctttaatggggtaaatgttctggct
ggggttggactactctcgactccgtacacagtgagagaagccggctggagtagcttgcta
gtcctggccctctttgctgttatctgttgttatacagcttctcttatgagatgctgcttt
gagagcagggaaggcatcataagttacccagatatcggagaagcagcatttggcaaatat
gggcggcttttcatctcgatcgtgctgtatgctgaactatattcatattgtatagagttt
atcattttagaaggagacaacataaccagcatatttcctggagcaagtttgcagttggga
agccttaatctcgactcagttcacttgtttggtattgtttcagctcttatcgttctgcca
actgtttggttgagggatcttcgagtgatatcagttctttcagcttgtggtgttcttgca
actgtagtcattgttgtctgcttggttttccttggaagttttggtggtattggctttgat
catactggagaactggtgaatttgaaagggatcccgtttgcaattggtgtgtatggattc
tgctactcggggcactccgtattcccaaatatatatcaatcaatggctgacaaaacaaag
ttcacaaaagcactaataatatgctttctgatatgctttctgctatacggtggtgttgct
gttgtgggttatcttatgttcggacagagcacactgtctcagataactctcaacatgcca
cctgattcaatcctttcaaaaattgcaatatggacaacgatcataaacccttttaccaaa
tacgccttgttgatgaatcctttggcgagaggcatagaggagctgcttcccccgaggatc
tctgacagttactggttctatattcttctgagaacagtactcgtcctctccactgtttgc
ttcgccttcgttcttcctttctttggtcttgtgatggctttaattggctctctcctcagc
atacttgtggcggttataatgccagctttatgcttcgtgaaaataatggggaagaaagcg
acgagagcacaggtgataacgagcttgagcatagtggtattcggtgtgataagtgcaact
cttgggacatattcttctctagcaggaattgcagataattattaa
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