KEGG   Salvia hispanica (chia): 125197846
Entry
125197846         CDS       T09851                                 
Name
(RefSeq) exosome complex component RRP41 homolog
  KO
K11600  exosome complex component RRP41
Organism
shis  Salvia hispanica (chia)
Pathway
shis03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    125197846
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shis03019]
    125197846
Messenger RNA biogenesis [BR:shis03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     125197846
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     125197846
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 125197846
NCBI-ProteinID: XP_047952324
LinkDB
Position
Unknown
AA seq 241 aa
MEFVNPEGLRLDGRRPMEMRQLRAEIGVVSKADGSAVFEMGNTKVIAAVYGPREVQNRSQ
QSNDQALVRCEYSMANFSTGDRMRKPKGDRRSTEISMVIRQTMEACILTHLMPRSQIDIF
VQVLQADGGTRSACINAATLALADAGIPMTDIVTSCSAGFLNGTPLLDLNYVEDSAGGPD
VTVGILPKLDKVTLLQMDSKLQMETFETVMQLATEGCKAVASYIREVLLENTKQLESRRG
V
NT seq 726 nt   +upstreamnt  +downstreamnt
atggagtttgttaatcctgaaggtcttcgattggacggtcgccgtcctatggagatgagg
cagcttcgtgcagaaataggagtggtttcgaaagccgacggctcagctgtttttgagatg
gggaacaccaaagtcattgctgctgtttatggacccagagaggtccaaaataggagtcag
caaagtaatgatcaggcactggtacgctgtgagtatagcatggctaatttcagtactgga
gatcggatgaggaaacctaagggtgacaggcgatcaacagagatatctatggtcattcgt
cagacgatggaagcatgcatattgactcacttgatgcctcgatctcagattgatatattt
gtccaagttcttcaagcggatggaggaacaagatcagcatgcataaatgctgcaacgttg
gcccttgctgatgctggtatccctatgactgatattgttacctcctgcagtgctggattt
ctgaacgggacccctctgctcgatctgaactacgttgaagatagtgctggtggacctgat
gttactgttggcattctgcctaagttagacaaagtcaccctccttcagatggactccaaa
ctgcaaatggagacatttgaaactgtcatgcagctagcaacagaaggttgcaaagcagtg
gcaagttatattcgtgaggtattactggagaacaccaagcaattggagtctcgcagaggt
gtatag

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