Salvia hispanica (chia): 125198571
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Entry
125198571 CDS
T09851
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00040
Pentose and glucuronate interconversions
shis01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125198571
Enzymes [BR:
shis01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
125198571
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Motif
Other DBs
NCBI-GeneID:
125198571
NCBI-ProteinID:
XP_047952847
LinkDB
All DBs
Position
Unknown
AA seq
442 aa
AA seq
DB search
MGRGGLYSLSLIFVLVLPFASANISHYDDYWSKKAAEAWNRTLATYEPMPAKVVSHFNEH
THRTLNELEGSNNTRRELSHRVYTGPCMATNPIDRCWRCDPNWANNRFRLADCALGFGRK
AKGGKGGKIYVVTDSSDNDMVNPKPGTLRHAVIQKEPLWIIFERSMVIRLNQELIMTSHK
TIDGRGASVYIANGAGITIQFVHNVIIHGLKMHRIVPGTGGEIRDSVDHYGFRTRSDGDG
ISVFGSTDIWIDHMSMTRASDGLIDVIWGSTGITISNGHFTDHDEAMLFGANDAHYIDKK
MQITVAFNHFGKRMVQRMPRCRFGYFHVVNNDYTHWNMYAIGGSMNPTIISQGNRYIAPP
LNGYAKEVTKREYTPESTWKSWTWRSQGDIFLRGAFFIESGDKNFVGKHPELYDHVEAAS
GEKVAEMTRFAGALGCRVGKAC
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggggcgaggggggttatattcgctctcgctcatctttgttttggttcttccattcgcc
tcggctaatatcagtcattatgatgattattggtctaagaaagctgcagaagcctggaat
cgcaccttggcaacttatgagccaatgccggctaaagttgtcagtcatttcaatgaacac
acccataggactcttaatgagctcgagggctcgaacaacacaaggagggagttgtcacac
agggtttacaccgggccatgcatggcgacaaaccccatcgaccgatgctggcgttgtgac
ccgaactgggccaacaaccggttccgcctggccgactgcgccctaggtttcgggcgcaag
gccaagggtggaaaaggcgggaagatctacgtggtcaccgactcctccgacaacgacatg
gtcaaccccaagccgggcaccctccgccacgcggtgatccagaaggagcccctctggatc
atcttcgagcggagcatggtgatccggctcaaccaggagctgatcatgacgagccacaag
accatcgatggccgtggcgcgtccgtctacatcgccaacggcgccggcatcaccatccag
ttcgtccacaacgtcatcatccacggcctcaagatgcaccggatcgtccccgggaccgga
ggcgagatccgcgactccgtcgaccactacgggttccgcacccgcagcgacggggacggg
atctccgtcttcggctccaccgacatctggatcgaccacatgtcaatgacacgtgccagc
gacggattgatcgacgtcatctggggatccacaggtatcactatttccaacggccacttc
accgatcacgacgaggcgatgctcttcggcgccaacgacgcacactacatcgacaagaag
atgcaaatcacggtggcgttcaaccacttcgggaagaggatggtgcagaggatgccgagg
tgccggttcgggtacttccacgtggtgaacaacgactacacgcattggaacatgtacgcg
atcggagggagcatgaacccgaccatcataagccaggggaacaggtacattgcgccgccg
ttgaacgggtacgcgaaggaggtgacgaagagggagtacacgcctgagtcgacgtggaag
tcatggacgtggaggtcgcagggagatattttcttgaggggggctttcttcattgagtcc
ggggataagaattttgtggggaagcatccggagctttacgaccatgtggaggcggcgtca
ggggagaaggtggcggagatgactaggtttgcgggggcacttgggtgtagagtggggaaa
gcttgctag
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