Salvia hispanica (chia): 125198606
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Entry
125198606 CDS
T09851
Name
(RefSeq) FACT complex subunit SSRP1-like
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shis03000
]
125198606
03036 Chromosome and associated proteins [BR:
shis03036
]
125198606
Transcription factors [BR:
shis03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
125198606
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
125198606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_box_5
HMG_WDHD1
YL1
CDC45
Motif
Other DBs
NCBI-GeneID:
125198606
NCBI-ProteinID:
XP_047952887
LinkDB
All DBs
Position
Unknown
AA seq
644 aa
AA seq
DB search
MADGHSFNNISLGGRGGTNPGQLKVHSGGILWKKLGGGKAVDVDKSDLLGLTWMKVPRSN
QLGVRTKDGLNYKFTGFRDQDVASLNTFFQSNFSATPEEKQLSVSGKNWGEVDLNGNTLT
FLVGNKQAFEISLADVAQTQLQGKTDVMLEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDENRPSAQVFRDKIVSMADVGAGGEEAVVTFDGIAILTPRGRYSVELHLSFLRLQGQAN
DFKIQYSSVVRVFWLPKFNQPHTFVVVTLDPPIRKGQTLYPHIVMQFETDAIMDTTLSMS
EDLYNSKYKEKLDPDHKGLIHEVFITILRGLSGAKVTKPGKFRSSQDGYAVKSSLKAEDG
VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHTAGGSNMHYFDFLIRLKTEQEHLFRNIQ
RNEYHNLFEFVKDKDLKMMNFNAGSVPNAEGVAAVLQSDIDDAVDPHLERIRNEAIGDES
DEEDEDFVIDKDDGGSPTDDSGGDDSDASDSGGEKEATPKKKPNKEPSAAKASSSRKKTK
DDDDDGKKKKQKKKKDPNAPKKAMSSFMFFSQAEREDVKKTNPGIAFTEVGKVLGERWNK
MTAEEKAPYEAKARADKKRYGDEISGYKNPQPMAIDSPDGSDTS
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggtcattccttcaacaatatctctctcggtggtcgcggaggaactaatcca
ggacaacttaaagtccactcaggtgggatactatggaagaaactaggaggtggcaaggct
gtggatgttgataaatccgatttgctgggccttacatggatgaaagtacctcgatctaac
caacttggagttcggaccaaagatggcctcaactacaagttcactggtttccgggatcag
gatgttgcgagccttaatacattcttccagtccaacttttcagcaactccagaggagaag
cagctttctgtcagtggaaaaaattggggagaagttgatttaaatgggaatacgcttact
tttcttgtgggcaataagcaagcatttgagatatctctagcggacgtagcacaaacccag
ctacaagggaaaactgatgtcatgttggaattccatgttgatgatacaactggtgccaac
gagaaagattcattaatggaaataagtttccacattcctaattcaaacactcaatttgtt
ggtgatgaaaatcgaccttctgctcaggtattcagagacaagattgtctcaatggcagat
gttggagcaggaggtgaagaagctgttgttacatttgatgggattgccatacttactcct
aggggacgatacagtgtcgaacttcatctttcctttttacgtctccaaggacaagctaat
gacttcaaaattcagtacagcagtgtagttcgtgttttttggttgcctaagttcaaccaa
ccacacacctttgttgtcgtgacactcgatcctccaattaggaagggccaaaccttgtat
ccacatattgtgatgcagtttgagactgatgctattatggacaccactttatcaatgagt
gaagacctttacaattccaaatacaaagaaaagcttgacccagatcacaagggactcatc
catgaggtgttcattactatactgcgtggtttgtctggtgccaaagtcaccaaaccaggg
aaattccgcagtagtcaggatggttatgctgtcaaatcatcactcaaagctgaagatgga
gttctatatcctcttgaaaagagctttttctttttacccaagccacccactctaattctt
catgaggagattgactacgtggagtttgagaggcatactgctggaggttcaaacatgcat
tattttgattttctcatcagactcaagactgagcaggagcaccttttcagaaatattcag
agaaatgagtatcacaatctctttgaatttgtcaaggataaggatttgaagatgatgaat
ttcaatgcggggagtgtcccgaatgccgaaggagtagcagctgttttgcagagtgatatt
gatgatgctgttgatccacatctcgagagaatcaggaacgaagcaattggagatgagagt
gatgaggaggatgaagattttgttattgataaagacgacggaggctcccccactgatgac
tctgggggagacgactctgatgctagtgacagcggaggggagaaagaggcaacaccaaaa
aagaagcccaacaaggaaccttctgctgcgaaggcgtcatctagtaggaaaaagaccaaa
gatgacgatgatgatggaaagaagaagaaacaaaagaagaaaaaggatccaaatgctccc
aaaaaagcaatgagttccttcatgttcttttctcaagccgaaagagaggatgtgaagaag
actaatccaggaattgcgtttacagaagtaggaaaagtactcggagaaagatggaataag
atgacagccgaggagaaggctccatatgaagcaaaagcccgggctgacaagaaacgctac
ggtgatgagatcagtggctataagaatccacagccgatggcaatcgactcgccagatgga
tctgacacctcttag
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