Salvia hispanica (chia): 125198819
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Entry
125198819 CDS
T09851
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00040
Pentose and glucuronate interconversions
shis01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125198819
Enzymes [BR:
shis01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
125198819
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
125198819
NCBI-ProteinID:
XP_047953037
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MGNHHGRHSLSGHRKNNHPPPFNYGSNPAPTTIVNPNMGLRLPYGHVDSSLRALAGQAEG
FGRFAVGGLNGAVYRVTTLADDGPGSLRDGCRKKEPLWIIFEVSGTIELSSYCSVSSYKT
VDGRGQRVKLTGKGLRLKDCEHVIICNLLFEGGRGHDVDGIQIKPNSKHIWIDRCSLSDY
DDGLIDITRQSTDITVSRCYFTNHDKTMLIGADPSHTDDRCIRVTIHHCFFDGTRQRQPR
VRFGKVHLYNNYTRNWGIYAVCASVESQVYSQCNFYEAGQQNKVAFKYYTEKAADKNVEC
TGCIRSEGDIFIGRTPPGLTPLPTETCVFHPSEFYDSWTVEPPTDELKHFLQHCTGWQGT
ARPADLPTS
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatcatcatgggcgtcactcactctccggccaccgcaagaacaatcatcctccg
ccgtttaattacggctcaaatccagctcccacaaccatcgtgaatccgaatatgggtctg
cgtctgccctacggccacgtcgactccagcctgcgggcgctggctggacaggccgagggc
ttcggccgtttcgccgtcggcggcctaaacggcgccgtttaccgcgtcaccaccctcgct
gatgatggaccaggttcactacgtgatggatgccgtaaaaaagagcctttatggatcatc
tttgaagtttcgggaaccattgaactctcgtcttattgtagtgtgtcctcttataaaact
gttgatggccgtggtcaaagagttaaactaactgggaaaggcttgaggttgaaggactgt
gaacatgtaatcatctgtaatctactatttgaagggggtagggggcatgatgttgatggg
attcagataaaacctaattcaaagcatatctggatagatcgttgcagtctcagtgattat
gatgatggactgattgatatcactcgacaaagcacagatattactgtttctaggtgttac
tttacaaatcatgacaaaacaatgctcattggtgccgatccatctcacacggatgacaga
tgcatacgtgttaccattcaccattgcttcttcgatgggacgcgacagcggcagccgcgt
gtcagatttgggaaagtacatttatataataattataccagaaactggggaatttatgct
gtttgtgccagtgtagagtcacaggtctactcccaatgcaacttttacgaggccggccaa
caaaacaaggtggcctttaaatattacactgagaaggcagctgacaagaacgtggaatgc
actggctgcatcagatccgaaggtgatatattcattggaagaactccgccgggtttgaca
cccctcccaactgagacctgcgttttccatccttccgagttctatgattcatggacagtg
gaaccaccaaccgacgaactgaaacattttcttcaacactgcacgggatggcaaggtact
gctcgccctgctgatcttccaacctcttga
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