Salvia hispanica (chia): 125199180
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Entry
125199180 CDS
T09851
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
shis
Salvia hispanica (chia)
Pathway
shis04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
125199180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shis04040
]
125199180
Ion channels [BR:
shis04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
125199180
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
SPEF2_C
DUF6525
Motif
Other DBs
NCBI-GeneID:
125199180
NCBI-ProteinID:
XP_047953252
LinkDB
All DBs
Position
Unknown
AA seq
772 aa
AA seq
DB search
MDASSRDEAPMLPASHLQSDNGGSSARRGISGRTRSVSMSFATESPHPSEYQQNLVGFTG
PLRAAKRNPQVQMSGPLYPGRNNELVFRPPQTAAEAENRARNGDGDYVGKNEHLWRSGQL
GKCSDPYCTACPMFYDAKGQQKPSRTTAMIDAKYRNMLYGDAQSWAKRMRVRFLSCIPGV
INPHAKLVQWWNKIFVMFCILASFLDPFFFFLLFVRQDYKCVELIMPKTREFLILRTITD
CVYFMHILLQFRLAYVAPETRVAGSGDLVDDPKKIAWNYFTTYFPVDLLVVLPMPQIILI
FVLPHSASSPGNEIIKFVLPSAILVQYIPRLSRFLPLVAGFSPTGFIFESAWANFLMNLL
TYILASHVVGSCWYLLSIQRVNKCLQKACEWNTTSNCKTFLSCSHDYEQRFPKYPDWSDW
KQNKNASACFTKEGFDFGICEAAVNLTTHKDIFDRYLYSLFWGFQQISTLAGNQEPSYMA
LEVVFTMFIIGIGLLLFALLIGNMQNFLQALGRRRLEKSLRSRDVEQWMSHRRLPKNLRS
RVRAAERFNWSATRGVNEDTLIENLPEDLQREIRRHLFKFVKKVRIFQLLDEPVIDAIQE
KLKTRSYIKNTKILYPGGLVDKIVFIIRGKMKSTGEDGNDSILSEGDVCGEELLTWCLEH
SSVSQDGKSIRLPRHGLLSDRHVTCLTNVEAFVLRAADFEEVAGLFTRFLKNPLVQGAIK
YESPHERGIAARRIQLAWRRKRKQTNQVDSSQVGSSRSQHNLSYRTRSRRKY
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggatgcttcatcgagagatgaagcacctatgctgccagcttcacatttacagtccgat
aatggcggctcctctgcaagaagaggaatttctggtaggacgaggagtgtgtcaatgtct
ttcgctacggagtctccacatccatctgaataccagcaaaatctagttggtttcactggc
cctttgagggctgcaaagcgaaatcctcaagtacagatgagtggtccgttatatcctggc
cggaacaacgagcttgtctttaggcctcctcagacagctgctgaggctgagaatcgggcc
aggaatggtgatggggactacgtgggaaagaatgagcacctctggaggtctgggcagctc
gggaagtgcagtgatccctactgcaccgcttgtcccatgttctatgatgctaaggggcag
cagaagccgtcaaggacaacagcgatgattgatgctaagtatcgcaatatgctctatggc
gatgcacaaagttgggcaaagagaatgcgcgtgcgttttctttcttgtattcccggggtt
attaatcctcatgcaaaactcgttcagtggtggaacaaaatcttcgttatgttttgcatt
ctcgcgtcatttctcgatccatttttctttttcctattgtttgtgcgccaggattacaaa
tgcgtcgaattaattatgcctaagactcgagaatttctcatcttaaggaccattaccgac
tgcgtttatttcatgcatatcctccttcagttcaggctagcttatgttgctcctgaaaca
agagttgcagggtctggcgatttagttgatgatcctaagaaaattgcctggaattatttc
acgacatactttcctgttgatctacttgttgtacttcccatgccacagattatattaata
tttgtcttaccacactctgcctcgtcacctggaaacgaaattataaaatttgtccttcca
tcggcaattctcgttcagtatataccaaggctgagcagattcttacctttggttgctggt
ttttccccaactggcttcatttttgagtcagcctgggcgaatttcctcatgaatcttctc
acgtacattttagcgagccatgtggttggctcatgctggtatcttcttagcatacagaga
gtcaataaatgccttcaaaaagcatgtgaatggaatacaaccagtaactgtaagacattc
ctcagctgtagtcatgattatgaacagaggtttccaaaatatccggactggagtgactgg
aaacaaaataaaaatgcaagtgcttgttttacgaaagagggttttgactttgggatatgt
gaagctgctgtcaatctgaccactcacaaggacattttcgatcgatacttgtattcactc
ttttgggggttccagcaaattagtacgctagctgggaatcaggagccgagctacatggct
ctcgaagttgttttcaccatgttcataatagggataggtctgctgcttttcgctcttctg
attgggaatatgcagaactttctgcaggcacttggacgcaggaggctagaaaaatcttta
agaagccgcgatgttgaacaatggatgagccatcgtcgcttacctaaaaatcttcgaagt
cgagtccgagccgcagaacgcttcaactggtcagcaactaggggtgtaaacgaagacacg
ctgatagagaacttgccagaggaccttcaacgagaaattaggcgccatctctttaagttc
gtcaagaaagtgcggatttttcaacttctcgatgaacctgtcattgatgctatacaagag
aagctgaagacaagatcctacattaaaaacactaagatactatatccgggtggtctagtt
gataaaattgtatttataattcgcggaaagatgaagagcacgggagaagatggcaacgat
tctatcctgtctgaaggcgatgtttgtggagaagaactacttacctggtgcctcgaacat
tcttccgtcagtcaagatggaaagagtattagacttccacgacatgggctgttgagcgac
aggcatgtaacttgcttaacaaatgtcgaagcctttgtattacgagctgctgattttgaa
gaagtggcgggtctcttcacaaggttcttgaagaatccactcgttcagggcgccataaag
tatgaatcacctcatgagcgtggaatcgcagctagacgaatccaactagcatggagacgc
aaaaggaagcaaacaaatcaagttgattcaagccaagtaggttcctcaaggtcacagcac
aacttatcatatcggactagaagcaggcgtaaatattag
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