Salvia hispanica (chia): 125200401
Help
Entry
125200401 CDS
T09851
Name
(RefSeq) SWI/SNF complex subunit SWI3B-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
shis
Salvia hispanica (chia)
Pathway
shis03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125200401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shis03021
]
125200401
03036 Chromosome and associated proteins [BR:
shis03036
]
125200401
Transcription machinery [BR:
shis03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125200401
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125200401
PBAF complex
125200401
GBAF(ncBAF) complex
125200401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
SWIRM-assoc_1
Motif
Other DBs
NCBI-GeneID:
125200401
NCBI-ProteinID:
XP_047954003
LinkDB
All DBs
Position
Unknown
AA seq
455 aa
AA seq
DB search
MAAETTPPPKPSSSEPSPVTPAASAADRPPPSSATPTAPSSITARLSEPDADVIHIPSYS
RWFSWNAVHECEARFLPEFFDGRSPSKNPKIFKYYRNAIIRRFRENPSRKITFTEMRKTI
VGDVGSIRRVFDFLEAWGLINYAGSTSRPQLKWEDKDTKSAAAQGGGDVAVVKKRVCSGC
KTPCTIACFESEKHDMTLCARCYVRGNYRVGLSSADFKRVEISEEAKSDWSDKDTLQLLE
ALMHYGDDWKKVAEHVGGRTAKECVAHFIKLPFGEQFDGPPESRELDTELGLQNAAMTTK
RMHLSPLADASNPIMAQAAFLSTLVGVDVAEVAARAAVTAISDVGNLKQQESGYASNGNT
LNNMEESLGEAKLQLGKEEEELEKTISGIAAQVDQTKEIEDKIFQFEEFDLQMERKLQQF
QQLQNLLFVDKLTILFHKNAAPKSGDNAAEPVKID
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgaaacgacgccgccgccgaaaccctcctcctctgaaccctctcccgtcact
ccggcagcctccgccgccgaccgtccacctccttcctccgccacacccacagctccgtcc
tccatcactgctcgccttagcgaacccgacgccgatgttattcacattcccagctactct
cggtggttttcgtggaatgccgttcatgaatgcgaggctagattcctaccggagttcttc
gatgggaggtcgccgtcgaaaaaccctaagattttcaaatattacaggaatgccatcata
cggcggttccgggagaatcctagccggaaaataacttttaccgagatgcggaagacgatt
gtgggtgacgtggggtctattcggagggttttcgatttcctggaagcttggggtttgatt
aattacgctggttctacttcgaggcctcagctgaagtgggaggacaaggatactaagtcc
gccgcagcgcaaggcggcggcgatgttgctgtggtgaagaagagggtttgcagtggttgc
aagaccccttgtaccattgcttgctttgagtctgagaagcacgatatgacactttgtgcg
aggtgttatgtgcggggaaattatagggtgggcttgagttcagcagattttaagcgggtt
gagatcagtgaagaggcgaagtcagactggagtgataaagacaccctgcaacttcttgaa
gctctcatgcattatggtgatgattggaagaaagtagcagagcatgttgggggaagaact
gccaaggagtgtgtggctcactttataaagcttccatttggcgagcaatttgacggtcct
ccggaatccagagagctggataccgagttaggtttacaaaatgcagcaatgaccacaaag
aggatgcatctttctccacttgctgatgccagcaaccccattatggcgcaggctgctttt
ctctctacattggttggagtagatgttgctgaagtggcagcacgtgctgcagtaacggct
atatctgatgttggtaacttgaagcaacaagaatctggatatgcatctaatggtaatacc
ctgaacaatatggaagaatctcttggtgaagcaaaattgcagctcgggaaggaagaggag
gagctggagaagaccatatctggaattgcagcccaggtagatcaaacaaaggagattgag
gacaagatttttcagtttgaggaatttgatttacaaatggagaggaaattgcagcagttc
caacagctccagaacctgctgtttgttgataaactaactatactgtttcataaaaatgca
gcaccaaaaagtggagacaacgcagcagagcctgttaagatcgattga
DBGET
integrated database retrieval system
