Salvia hispanica (chia): 125200557
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Entry
125200557 CDS
T09851
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125200557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shis03021
]
125200557
Enzymes [BR:
shis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125200557
Transcription machinery [BR:
shis03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
125200557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
125200557
NCBI-ProteinID:
XP_047954163
LinkDB
All DBs
Position
1:complement(49724929..49736837)
Genome browser
AA seq
1184 aa
AA seq
DB search
MGASTGVNEEDKVGKAVRRPHLAEEKDYEALRDIFRHHIESFDYMLQQGLYVMMQNVKPV
EVLDPATKLKLRIWLSDPEIYNPQKEFSKVMTDPLYPFECRQAKLSYSGTFMANLNFQYG
DGGVIRDQINLGQFPIMLKSKKCHLRAAETPKKLVSLKEEPSEMGGYFILNGLERVIRLV
VLPKRNYPTSMVRNSFRERREGYTDKAVVIRCVREDQSAVSVKLYYLNSGSARLGFWIQG
REYLLPVGIILMALTETTDLEIFASITSSYNEKYDRGKGSVGTQLIGERAQIILNELRNF
KLYTRTQCLQHIGEHFQAVMVGLEKQSYSDVADAVLRDYIFVHLDDNIDKFNLLILMLQK
LFSLVDHTSVPDNPDSLQHHEVLLPGHLITIYLKEKLQDWLLRAKRLLQDEVDKDDKKFE
LSSVADARKVIDKSGPKQIGAAIENLLKTGRLNTQSGLDLQQRAGMTVMAERLNYLRFIS
HFRAVHRGAAFAGLRTTSVRKLLPESWGFMCPVHTPDGEPCGLLNHMTSSCRLTSYYDSK
GKLKDFLEIRKSISKVLVSIGMTPALPKLLLAGPPEVLPVLLDGRVVGSIASNIIEKAVS
HMRRFKAEASEIPEDLEVGYVPLSMGGAYPGLYLFTSASRFVRPVQNLQIPSEKSNNIEL
IGPFEQVYMEISCPDGGNGGRKDVFPATHAEIHPTGILSVVGNLTPWSDHNQSPRNMYQC
QMAKQTMGFSCQSLNARADQKLYHLQTPQTPIVRTKTYEKYNIDDCPLGTNAIVAVLAYS
GYDMEDAMVLNKSSVDRGMFRGYIYQTETVDLAEDKFRGDRFQRSFGRSNVDKSSHQFID
SDGLPFVGQSIGPGDPYCSVYNEVTSSVSTNKLKGSDHAYVDYVAVDSKNKKHLQKANIR
FRHPRNPVIGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFPSRMTIAML
LESIAAKGGALDGNFVDATPFSSSMKKSDGSESDSSLIDELGSQLVKRGFNHHGLEVLYS
GVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGKIDQVTRQPIKGRKRGGGVRFGEME
RDSLLAHGAAYLLHDRLHKSSDYHIADVCSICGSILTTSLIQSDQKKVREMIGMRLPSKA
PKKVTCVSCKTSKGMETVAMPYVFRYLAAELAGMNIKMTLELSN
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgagcacgggagttaacgaagaagacaaggtcggaaaggctgtaaggcggccg
cacctggcggaggagaaggactatgaagctctacgcgatattttccgccaccatattgaa
tcattcgactatatgcttcagcaaggcctctatgtcatgatgcagaacgtcaaacccgtc
gaagtcctcgatcctgcaaccaagctcaagcttagaatttggctctctgatccggaaata
tataatcctcaaaaggagttttctaaagttatgacagatccattatatccttttgagtgt
aggcaagcaaaactctcgtattctgggacattcatggcgaatttgaattttcagtacggt
gatggaggagtcataagagatcaaattaatcttgggcagtttcctatcatgttaaagtcc
aaaaaatgtcatcttagggcggcagaaactcccaagaaattggtttcactcaaagaagag
ccttcagaaatgggaggatactttatcctgaatggacttgagagagttattcgtcttgtg
gtactcccaaagagaaattatccaacgagcatggtgcggaattcttttcgtgaacggcgt
gaaggttatacagataaagcagtagtcataagatgtgttagagaagaccagtctgccgtt
tcagttaaactatactaccttaatagtgggagtgcaaggcttgggttctggatacaaggg
agggagtatttgcttcctgttggaatcatattaatggctctgacagagacgactgatctt
gaaatctttgcgagtataacatccagctacaatgaaaagtatgaccgaggaaagggatct
gttggcactcaactcattggtgaaagagcacaaattattttgaatgagcttcggaatttc
aaactctatactcgcactcagtgtctacaacatattggtgagcatttccaggctgttatg
gtgggactggaaaaacaaagctactctgatgttgcggatgctgtgttaagagattacata
tttgtccatctagatgacaatattgacaagttcaatctactcattttaatgctgcagaaa
ttgttttctctggttgaccacacatcagtaccagacaaccctgattctttacaacaccat
gaggttctactgcctggccacctaataactatttatctcaaggaaaaattacaagactgg
ttactgagggcaaaacgattactacaagatgaagtagacaaagacgacaaaaaatttgaa
ttaagcagtgtggcagatgctaggaaagtcattgataaaagtggtccgaagcaaattggg
gcagctattgaaaatttgctgaagactggaaggttgaacacacaatcaggtctagattta
cagcagagagctgggatgacagttatggctgagagattaaactatctgcgtttcatttca
cactttcgagctgttcatcggggtgctgcatttgctgggcttcgtacaacaagtgttcgg
aagttgttgcctgaatcttggggctttatgtgtcctgttcacacacccgatggtgagcca
tgtgggttgctgaaccatatgacttcttcttgccggttaacttcatattatgattcaaaa
gggaaattaaaagacttcctagaaatccggaagtcaatatcaaaagttttggtaagcatt
ggaatgactccagcattgccgaagcttctgctagctggccctcctgaagtacttcctgtt
cttctagatggtcgtgtagtgggttctattgcttctaatataatagaaaaggctgtctcc
catatgcggaggttcaaggcagaagcttcagagatacctgaagatcttgaggttggttat
gttcctttgagcatgggtggggcttaccctggcttatacctgttcacatctgcatctaga
tttgttcgtccagtgcagaatctccaaataccttctgaaaagagcaataatattgagctc
ataggtccctttgagcaggtttacatggaaataagttgtcctgatggaggaaatggtgga
aggaaggatgtttttcctgcaactcatgctgaaattcatccaactggaatattgagtgtt
gttggaaatcttacaccttggtctgaccacaatcagagtcctcgtaatatgtaccagtgc
cagatggcaaaacaaacaatgggtttttcttgtcaatctctaaatgctcgagctgatcaa
aagctgtatcatcttcagaccccacaaacaccaattgtgcggacaaagacatatgaaaag
tacaatatcgatgactgtccacttggaactaatgcaattgtagcagttttagcatattcc
ggatatgacatggaggatgcaatggttttaaataagtcatctgtggatcgtggcatgttc
cgtggatacatataccagacagaaacagttgacttggctgaagataagttcaggggagat
cgcttccaaagatcatttgggagaagcaatgtggataaatcaagtcatcagtttattgac
tctgatggtctaccatttgttgggcagagcataggtcctggtgatccatattgtagcgtt
tataacgaagttacaagttcagtatcaactaataagttaaaaggttcagatcacgcatat
gtggactatgttgctgttgattcaaaaaacaaaaaacacttgcaaaaggcaaacattcgt
tttaggcacccgagaaatccagttattggtgataaatttagcagcagacacggccaaaag
ggtgtttgctctcagctttggcaggatactgacatgcctttctctggagccaccggaatg
aggccagatcttatcatcaatcctcacgcatttccttctcggatgacaattgctatgctt
ttagaatcaattgctgctaagggaggcgccttggacggaaattttgtggatgctacacct
ttttcgagctcaatgaagaagtctgacgggtcagaatctgacagttcacttatagatgag
cttggttcgcaattggttaaacgtgggtttaatcaccacgggctggaggtactgtacagt
ggcgtttatgggacggagctgacatgcgaaatatttattgggcctgtatattatcagcgt
ctccgtcacatggtttccgataaatttcaggttcgttccacaggaaaaattgaccaggtg
acgagacaacctatcaaaggaaggaagcgtggtggtggtgtgcgttttggggaaatggaa
cgtgattcccttctagcacacggtgctgcatacctgttacacgacaggctccacaagagt
tccgactatcacattgctgacgtgtgctccatttgtggaagcatcctgacgacatcacta
atccagtcggatcagaaaaaagtgcgtgaaatgattggtatgaggctgcctagcaaggct
ccgaaaaaggttacgtgtgtttcctgcaagactagtaagggcatggagaccgttgccatg
ccttacgtcttcagatatttagctgcggaattggcaggcatgaacatcaaaatgactctt
gaactaagtaactga
DBGET
integrated database retrieval system
