Salvia hispanica (chia): 125200681
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Entry
125200681 CDS
T09851
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
125200681
Enzymes [BR:
shis01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
125200681
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
125200681
NCBI-ProteinID:
XP_047954367
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Position
1:complement(11471090..11475262)
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AA seq
678 aa
AA seq
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MGRKIQCSWNLSCLPLLLLQIFLLTQCSASRWQKVHKIETDGDTYYPPVKLHDFDDHVVL
DNGILNVTLSTPEGMITRITYNGIENLLKQEYNENNRGYWDLVWSSPDHPKEIFDKLDGT
NLFVVHEDEEQVELSFVRTWDSSQTGVPPLNIDKRFIMLRGCPGFYSYAIFERLEGWPDL
HLSQGRIVFKLQEKIFQYMAISDDRQRIMPTSEDRNRSQVLDYPEAVLLTNPSNAFLAGE
VDDKYQYSSDNKDSLVHGWIATDLPTGFWIITPSNEFKTAGPMKQDLTSHAGPIALSMFF
SAHYAGLPLELEFRGGEPWKKVFGPVFVYLNSVQPGQDPLSLWPDAKQQMLVETQHWPYD
FLASDDFPRAKQRGRVSGRLLVRDSFIYKRLMTASNAYIGLASPGDLGSWQRENKGYQFW
SQCDALGYFKINNIRAGNYSLYAWVPGIIGDYKYNVPINIETGSKIRLKNLVYDPPRDGP
TVWEIGVPDRSAAEFYVPDPNPALMNQLYNVHPDRFRQYGLWDRYTDLYPDGDLVYSVET
SVYQTDWYFAHVNRNIGNKTYVPTTWRVLFNLTDVDTSANYTLRIALASANDAELQVRIN
AEVGEAPCFTTGLIGKDNSIARHGIHGLYWLYSVSVRGSVLVCGQNAMLLTQLRGSSPWR
GIMYDYIRLEGPFSNIQT
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaagatacaatgtagttggaatttgagttgcttgcctcttcttcttcttcaa
atattcttgcttacacaatgttctgcatcaagatggcaaaaggttcacaaaattgagacc
gatggcgatacatattaccctccagtaaagttgcatgatttcgacgaccacgtagtgttg
gacaatggcatcctcaatgtgactctgtcaaccccagagggcatgatcactagaataaca
tacaatggaattgaaaatctactcaaacaagagtacaatgaaaacaacagagggtattgg
gatcttgtttggagctcacctgaccaccctaaagaaatttttgacaagcttgatgggact
aatctttttgttgtacacgaagacgaagaacaagtggagctctcgttcgttcgcacttgg
gattcttcgcagacaggggttcctcccctcaacattgacaaaaggttcataatgctgcgc
gggtgccctggattctactcgtatgcaatatttgagcgcctcgaaggctggccggatctt
cacttgtctcaggggaggatagtgtttaagctacaagaaaagatctttcaatacatggca
atatcggacgacaggcagaggattatgccaacaagcgaagaccggaacagaagccaggtt
ctagactacccggaagcagttctattaacgaatccaagcaacgctttcctcgcaggagag
gtggacgacaagtaccaatactcaagcgacaacaaggacagtctggtccacggctggata
gccacggaccttccaacagggttctggatcatcaccccgagcaacgagttcaagacggcc
gggcccatgaagcaggacctcacctcgcacgccggcccaatcgccctgtctatgttcttc
agcgctcactatgccggcctgccgctggagctggagttccggggtggcgagccgtggaag
aaggtgttcggacccgtgttcgtctacttgaactcggtccaacccggccaagatccgctc
tcattgtggcctgatgccaagcaacagatgctcgtagaaacgcaacattggccgtatgat
ttcctggcatcggacgacttccctcgtgccaagcagagaggcagagtaagcggccggtta
cttgtccgcgacagttttatctacaaacgccttatgaccgctagcaatgcatacattgga
cttgcttcccccggggatctgggatcatggcagagagaaaacaagggctatcagttctgg
agccaatgtgatgctttaggatacttcaaaatcaataacatcagagctgggaactatagc
ctctatgcttgggtgcccgggatcattggagactacaaatacaacgttccgatcaacatc
gaaactggaagcaagattaggctgaaaaatcttgtgtatgatcctccgagggatgggcct
acagtgtgggaaatcggggtccctgaccgttctgctgctgagttctacgtgcctgatcca
aacccggctctcatgaaccagctctacaatgtccaccccgacagattcaggcagtatggc
ttgtgggatcgttacacggatctgtatccggatggggatttggtatattcagtcgaaaca
agcgtttatcagacagattggtactttgctcatgtgaatagaaacataggaaacaaaacc
tatgtcccaacaacatggagggttctattcaacctcacagacgtcgacacatcagcaaac
tacaccctgcggattgcactggcctcggccaacgatgctgagctgcaggtgaggatcaac
gcggaggtaggagaggctccatgttttacgacggggctaattgggaaggacaattcgatt
gctagacatggaatccatggactgtattggctttatagtgtgagtgtaagaggttctgtt
cttgtttgtgggcaaaatgcaatgttgttgactcaattgagaggatctagcccttggaga
gggatcatgtatgattatattcgtctggagggtccattttcgaatattcagacatga
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