Salvia hispanica (chia): 125200682
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Entry
125200682 CDS
T09851
Name
(RefSeq) E3 ubiquitin-protein ligase HAKAI homolog isoform X1
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125200682
04131 Membrane trafficking [BR:
shis04131
]
125200682
04121 Ubiquitin system [BR:
shis04121
]
125200682
Enzymes [BR:
shis01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125200682
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
125200682
Membrane trafficking [BR:
shis04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
125200682
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125200682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
Prok-RING_4
IBR
IBR_1
Motif
Other DBs
NCBI-GeneID:
125200682
NCBI-ProteinID:
XP_047954368
LinkDB
All DBs
Position
1:11479640..11483056
Genome browser
AA seq
441 aa
AA seq
DB search
MLQIRLSKPASEASATANPAPVDTVTVACPDHLVLADLPVAKGMGAASATAVIKSVGRRS
RRQLGERVHFCVRCDFPVAIYGRLSPCEHAFCLDCSRSHSFCYLCDERIQKIQTIKMMEG
IFICAAPHCLKSFLKKSAFELHINEAHSDLIHPNKEKEGNESEAMSARKPSASDSTVQAP
PRPVFSPHSSSQLHDSEDKAQLPQSREQPPPRPAVQQRPAPPFPRQISDHPSEHPDRGTS
QNHFPHHTFEAHVQGSGRQDSVNPNSGPAPPQPQYDYPPYAADGTQQYFGGPYGMPRPGS
TPEGGPGQGSLLGFPPGPAGPMNFPQNYPQWNAVPGSVPLEPPMVSQRSTDGFMNVDPQG
RGFFQNAGNKSVEQQRQGGNFVDPRDGKGILAPQPLHLPPPPSVPHPHLQRGRSYSGDGN
NDGPPGFSWPAERRDSFGSGD
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagattcggcttagcaagccagctagtgaagctagtgcaactgcaaatcctgcg
cctgtggatactgtcacagtggcttgccccgatcatcttgtgctagctgatcttcctgtg
gccaagggtatgggtgcagcatctgcaactgctgtcatcaagtctgttgggcgccgctcc
cgtcgccagctcggtgagcgtgtccatttctgcgttcgatgcgactttcccgttgctatt
tatggccgtctgagcccatgtgagcatgccttctgtttggactgttccaggagtcattct
ttttgttatctttgtgatgaacgcattcagaagattcagacaattaaaatgatggaagga
atcttcatatgtgcagcccctcattgtctgaagtccttcttaaagaagagtgcctttgag
ttgcatataaatgaggcccattctgatcttattcaccccaataaggaaaaagaagggaat
gaatcggaagcaatgagtgctaggaaaccttcagcctctgattccacagttcaagcaccc
ccaaggccagttttttcgccccattcaagctctcaacttcatgatagtgaagacaaagcc
cagctgcctcaatccagggaacaaccacctccgagacctgctgtacagcaaaggccggcg
ccaccttttccaagacaaatttccgatcatccatcagagcaccctgatagaggtacttcc
cagaaccactttcctcatcatacttttgaagctcatgtgcagggtagtggtcggcaagat
tcagttaacccgaattcaggtccagctccacctcaacctcaatatgattatcctccttat
gcagctgatggaacacaacagtactttggcggaccatatggaatgccaagaccaggttct
acaccagaaggtggaccaggacagggctcgttgctaggtttcccacctggtcctgccgga
cccatgaattttcctcaaaattatccacagtggaatgcagtgcccgggtctgtgcctctg
gaacctcctatggtatctcagaggtctacggatggctttatgaatgtcgaccctcaagga
agaggattctttcagaatgctgggaataagagtgtggaacaacagaggcagggtgggaac
tttgtggacccaagagacggtaaaggaattttggcgccccaaccacttcatcttcctcca
ccaccttcggtgcctcatccccacctgcaacgaggcagatcatactctggtgacgggaat
aatgatgggcctccaggcttcagctggccagctgagaggcgagatagcttcggaagtgga
gactag
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