Salvia hispanica (chia): 125200786
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Entry
125200786 CDS
T09851
Name
(RefSeq) LOW QUALITY PROTEIN: rab escort protein 1-like
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
shis01006
]
125200786
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125200786
Prenyltransferases [BR:
shis01006
]
Protein prenylation
Rab geranylgeranyltransferase
125200786
Membrane trafficking [BR:
shis04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125200786
Endosome - Lysosome transport
Rab GTPases and associated proteins
125200786
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDI
RAE1_2_domI_C
Motif
Other DBs
NCBI-GeneID:
125200786
NCBI-ProteinID:
XP_047954508
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Position
1:38083104..38089084
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AA seq
575 aa
AA seq
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MCCCVPTIKKKFVLQTGRRVFSLLRQILNSTSLMDETMLYPLIEPSNFDLIVVDTSLPES
IIAAAASAAGKTVLHLDPNPFYGTHSASLPLDDFISFLRSQSQSPSQPPLQTSDDDASVP
LGTRRLYSDLEIKSLSSEPLDNSRKFSVDLVAPRAFLCADSMIELILKTGINQYMEFKSV
DTSFVSSGEGKLESVPDSRSAIFKSRSLLGPEKYQLMNFFKHVQGIFANGSEEDLEIPFV
VFLTKRGLSQKLKSIILYTIAWADHDQENLELCKDVISTKSGINRLALYHSSIGRFPNAN
GAIIYPIYGQGELSQAFCRCAAVKGCIYVLRMPVIALLMDKDGRTYQGVRLASGQELTSP
QLILAPSFAIPTTSPRVVEVKISNDKSPSDAEGKVARGICIAKKSIKPEAANCLVFFPPR
SLYPEQITSVRVLQLSSNSIFHVLLCLNSRFVTYLSAVCDDAVEGKKLLNAAINALFSMA
VSSSPENNDRDNLCEHTEEKPCLLWSALYIQDLTKFHGVYDSIRFTPMPDEHLHYDDILD
ATEKLFKELFPNEDFFAVTSESEEHPDDGNTELDP
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtgctgctgtgttcccaccataaagaagaaattcgtcctacaaactggcaggcgtgtt
tttagcttgctgaggcaaattctcaactcaacctcacttatggacgaaactatgttgtat
ccgcttatcgaaccctccaatttcgaccttattgttgtcgacaccagcctcccggagtcc
atcatcgccgccgctgcctccgccgccggaaagactgtcctccacctcgatcccaatccc
ttctacggcactcactcggcttcgctccccctcgatgacttcatctccttcctccgatcc
caatcccaatctccatctcaaccacctcttcaaacctccgatgatgacgcttctgtccct
cttggaactcgccgcctctactccgacctcgaaatcaaatcactctcctccgagccactc
gacaattccagaaaattcagcgtcgacttggttgcccctcgcgcattcctctgcgctgat
tccatgatcgaattgattttaaagacgggaatcaatcagtacatggagttcaagagcgtg
gatacgagcttcgtcagcagcggagagggaaaattggagagtgtgcctgattcccggagc
gcaatttttaagagtcggagcttgctggggccggagaagtatcagttgatgaacttcttt
aagcatgtgcagggaattttcgcgaacgggtccgaggaggatttggagattccatttgtg
gtgttcttaaccaaaaggggtttgtcgcagaaactcaaatcgattatattgtacactata
gcctgggctgatcatgatcaggaaaacttggagttgtgtaaagatgttatcagtactaag
agtgggataaatcggctcgctctttaccactcatccattggaaggtttcctaatgcaaat
ggtgccataatataccccatttatggccaaggggaactttctcaagctttttgtcgttgt
gctgctgtcaaggggtgcatttatgttttaaggatgcctgtaattgctctgctcatggat
aaggatgggcgtacctatcaaggtgttagattagcatctggccaggagctaaccagtcct
cagctgattcttgctccttctttcgcgattccaacaacttcacctcgtgttgtagaggtg
aaaatttctaatgataaaagcccctcagatgccgaagggaaggttgcccggggaatttgc
attgccaagaaatctataaagccagaagctgctaattgcctggtgttctttcctccaaga
tctctgtacccagaacagataacatcagtccgtgtattgcagctgagcagtaatagcatc
ttccacgtgttattgtgtctgaattccaggtttgtgacgtacctgtcagctgtatgtgat
gatgctgtggaagggaagaaattactaaatgcagccataaatgctctgttctctatggct
gtatcttcatcacctgagaacaatgacagagataatttatgtgagcacacagaagaaaaa
ccttgtttgctttggagcgccttgtacattcaagatctgactaagtttcacggtgtttat
gactccatcaggttcactccgatgccagatgagcatctgcattatgatgacatcctagac
gcaacagaaaagctgtttaaagaattatttccgaacgaagactttttcgcagtgacaagc
gaatctgaggagcatcctgatgatgggaacactgagttggatccatag
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