Salvia hispanica (chia): 125200824
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Entry
125200824 CDS
T09851
Name
(RefSeq) protein RTF1 homolog
KO
K15178
RNA polymerase-associated protein RTF1
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shis03021
]
125200824
Transcription machinery [BR:
shis03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
125200824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
125200824
NCBI-ProteinID:
XP_047954557
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All DBs
Position
1:16588164..16591143
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AA seq
628 aa
AA seq
DB search
MADLEKLLLEAAGRTSTPGRNRHSSPPSRRRRKGSYSDDGSDSKNDDSDGDRGYSSRKPS
GSQVPLKKRLDPADRDDDRSSEEGDEKDDYDRDRDSDNDSVGSDLYKDEDDREKLSKLTE
LEREMILEARATKRSDRDLTEKLKKRKGQDNRKGSPPKAPTRNMRSKAQRAGALDELVKR
RRESAKGSGSRYSPVKRRTITSATLSSPSRSESGSRSDGDLTGDGGLADSDDDKILSESK
VPTFEDIREITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRTGPIYRLCVVRNVDATD
PDRQYKLDNKTTHKYLNVVWGNESSAARWQMAMISDAAPLREEFDQWVREVERSGGHMPS
KQDVLDKKDAIQKTNSFVYSAATVKQMLQEKKSATWRPLNVAAEKDRLRRALEVAKENDD
EVEVDRIKARLKELEASRRVQVKDSKAIKLAEMNRKNRVENFKNASELKPINSGLKAGEA
GYDPFSRRWTRSRNYYVANSNGGGAAGVPNDEAVAATRSDNGAGGGLAEMGMEATAAAIE
AAADAGKLVDTRAPVDQGTESYMLHNFELPISLAVLQQFGGPQGAQAGYMARKQMIEATL
GVRVPESDGRRHALTLTVSDYKRRRGLL
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggcggacttagagaaattgctccttgaggcggcaggaaggacaagtactcctgggagg
aacaggcattcatctccgccatcgaggaggaggcgaaaaggctcatattctgacgatgga
agtgactcaaaaaatgatgattctgatggtgatcgtggctattctagtagaaagccttcg
ggctcacaggtgcctctaaagaagagattggaccctgcagatagagatgatgaccgtagt
agtgaggaaggtgatgagaaagatgattatgatcgtgatcgtgacagtgacaatgattcc
gttgggagtgatttatacaaggatgaagatgacagggaaaaattatcaaagcttactgag
ctcgaacgtgaaatgatactagaagcccgtgctaccaagaggagtgatcgagatttgact
gagaagctgaaaaaaaggaaaggccaagacaacagaaaaggaagtccccctaaagcgcct
acacgtaacatgcggtcgaaagctcaaagggcgggtgcattggatgaattggttaaacga
agaagagagtcagctaaaggatctggcagccgatactcacctgtgaagagaagaactatc
acttctgcaaccttgagtagccctagcaggagcgagagtggatctcgcagtgatggagat
ttgacaggtgatggtggattggctgatagtgatgatgacaagattctgtcggagtccaaa
gtgccaacatttgaagacatcagggaaatcacaattcgcaggtcaaaacttgcaaagtgg
ttcatggagcccttctttgatgaacttattgttggctgtttcgtgcgagttggaattggg
aagtcaaggactggtcctatctataggctttgtgtggtacggaatgttgatgctacagac
cctgatcgacagtataagcttgacaataagactacacacaagtacctgaatgtggtttgg
ggcaatgagagctctgctgctaggtggcagatggcaatgatttccgatgctgctccttta
agggaggagtttgatcagtgggttagggaggttgagcgcagtggtggtcacatgccttca
aaacaggatgttttggataagaaggatgccatccagaaaacaaattcattcgtctactct
gcagccactgtaaagcagatgctgcaggagaaaaaatcagccacgtggaggccgctaaat
gttgcagcagagaaagatcgtctgaggagggcgttggaagtagccaaggagaacgatgat
gaggtagaggtggataggataaaggcgaggctaaaagaattggaagcaagtcgccgggtc
caggtgaaagactccaaggcaattaagctggcagaaatgaacaggaagaacagggtggag
aatttcaaaaatgcatcagagctgaagccgataaactctggtttgaaagctggagaggcc
gggtatgatcctttctccagaagatggactagatcgaggaattattacgtggcgaacagc
aatggaggaggagctgctggtgtgccgaatgatgaagcagttgctgctacacgtagtgac
aatggagcgggaggaggtctcgcagagatgggaatggaagctacagctgcggccattgaa
gcagcagcagatgctggtaagttagtggacacaagagctccagttgatcaagggactgaa
tcatacatgctacataatttcgaactgcccatatcgctagctgtgcttcagcaattcggg
ggccctcagggagcccaagccggatatatggctagaaaacagatgatcgaagccactctc
ggggtgagagtgcctgagagtgatgggaggagacacgcacttaccctgaccgtcagcgac
tataagagacggaggggtctgctctga
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