Salvia hispanica (chia): 125200832
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Entry
125200832 CDS
T09851
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B-like
KO
K03253
translation initiation factor 3 subunit B
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125200832
03012 Translation factors [BR:
shis03012
]
125200832
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
125200832
Translation factors [BR:
shis03012
]
Eukaryotic type
Initiation factors
eIF-3
125200832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
ANAPC4_WD40
WD40_WDHD1_1st
RRM_1
Beta-prop_ELP1_1st
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
125200832
NCBI-ProteinID:
XP_047954584
LinkDB
All DBs
Position
1:complement(5354536..5358497)
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AA seq
715 aa
AA seq
DB search
MADVMSTEDLHATAARLNVDLDSLDLDSIRLPAGETFGIVSDDEDLKKEEDFEFEEGFGN
IIVVDNLPVVPKEKFDKLEGVVRKIYSQIGVIKEGGLWMPTDPDTQKTLGYCFIEYNTPQ
EAELAKEKTHGYKLDRSHIFSVNMFDDIEKFLKVPEQWAPPESKPYTPGENLQKWLMDEK
ARDQFVIRAGTDTEVLWNDARQSKPELVYKRSYWTESFVQWSPLGTYLATVHRQGAAVWG
GATTFNRLMRYQHSQVKLIDFSPGERFLVTYSSQEPSNPRDTHRVVINIFDVRSGKLMRD
FKGSADEFAIGGTGGVSGVSWPVFRWGGGREDKYFARIGKNAVSVYETETFGLIDKKSIK
VENVVDFSWSPTDSILALFVPELGGGNQPARVSLVQIPSKVELRQKNLFSVSDCKIYWQS
NGEYLAVKVDRYTKTKKSTYTGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFA
VIHGDNPRPDVSFYSMRSGTNTGRVSKLATLKGKQANALFWSPGGRFIILAGLKGFNGQL
EFYNVDELETMAQAEHFMATDVEWDPTGRYCVTAVTSVHEMENGFNVWSFNGKLLYRILK
DHFFQFLWRPRPPSFLTAEKEEEIAKNLKKYSKKYEAEDQDVSMLLSEQDREKRKMLKEE
WARWIGEWKRLHEEEKLERQKLRDGEASDEEEEYEAKDVEVEELLDVTEEVISFD
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtgatgtcgacggaagatttacacgccaccgccgcccgcctcaacgtggac
ctcgactctctcgatcttgattctattcgcctgcccgccggagaaaccttcggaatcgtc
agtgacgatgaggatttgaagaaggaggaagatttcgaatttgaagagggcttcgggaac
ataatcgtggtggacaatttgccggtggttccaaaagagaagtttgacaaattagaagga
gtggttcgcaaaatttacagccaaataggtgttatcaaggagggtggtctctggatgccg
accgatcccgacactcagaaaaccctgggatactgcttcattgagtataacactcctcag
gaagctgaactagctaaggaaaagacccatgggtacaaactggatcgttctcacatattt
tctgttaatatgtttgatgatatcgagaagtttttaaaggtcccagagcagtgggctcct
ccagagagcaagccttatactccaggggagaatcttcaaaaatggcttatggatgaaaag
gcccgcgatcagtttgtgatccgtgctggcactgatactgaggttttatggaatgatgca
aggcagtcaaaacctgagcttgtttacaaaagatcctattggacagaaagttttgttcag
tggtccccacttgggacttacttggccacagtacacaggcagggtgctgcagtttggggt
ggtgctactactttcaaccggttgatgcgttatcaacattcccaggtaaaactgatagac
ttctcacctggtgagagatttctggtgacttacagcagccaggagcctagcaatccacgt
gacacccatagggtcgtgattaacatttttgacgtaagaagtggaaaattaatgagagat
ttcaaaggtagtgcagatgaatttgctattggtggaactggaggtgtcagtggcgtttct
tggcctgttttcaggtggggtggcggacgagaagataagtactttgccagaatcggaaag
aatgccgtgtctgtttatgaaacagaaacctttggtcttattgacaagaaatcaataaag
gtagaaaatgttgttgacttcagttggtcacctacggattccattcttgcactttttgtg
cccgaactgggtggaggaaatcaacctgcaagggtgagtcttgtgcaaatcccaagcaaa
gtagagttgaggcaaaagaatctattcagtgtcagtgattgtaaaatatactggcaaagt
aatggggaatatcttgctgttaaagttgatagatacacaaaaacaaagaaaagcacatat
actggctttgagcttttcaggatcaaggaaagggacatacctattgaggttctagagctc
gataataaaaatgataagattattgcctttgcttgggagccaaaaggccacaggtttgca
gttattcatggtgataatccaaggcctgatgtgagtttctactcgatgcgtagtgggact
aacactggccgggtttcaaagctcgctaccctcaagggtaagcaggccaatgctcttttc
tggtctccaggtggccgtttcatcattcttgctgggctgaaaggtttcaatggacagtta
gagttttataatgtggatgagcttgagaccatggctcaagctgagcacttcatggcaaca
gatgttgaatgggatcctactggaaggtattgtgtgactgcagtcacatctgtccatgag
atggaaaacggttttaacgtatggtccttcaatggaaaactgctctaccgaatcctcaag
gatcatttctttcaattcttgtggcgtccaaggcctccgtctttcttgacagctgagaag
gaagaagagattgctaagaatctgaagaaatacagcaagaaatacgaggctgaggatcaa
gatgtatctatgttgctgagtgagcaggaccgcgagaagaggaagatgttgaaggaagag
tgggctagatggattggtgaatggaagcgattgcacgaggaagagaagttggagagacag
aagctccgtgatggagaagcaagtgatgaggaagaagagtacgaagcaaaagatgtggaa
gttgaggaattattggatgtcacggaagaagttatttcttttgattaa
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