Salvia hispanica (chia): 125200880
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Entry
125200880 CDS
T09851
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125200880
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shis01002
]
125200880
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125200880
Enzymes [BR:
shis01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125200880
Peptidases and inhibitors [BR:
shis01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125200880
Ubiquitin system [BR:
shis04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125200880
BRITE hierarchy
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-C4_Topoisom
Motif
Other DBs
NCBI-GeneID:
125200880
NCBI-ProteinID:
XP_047954649
LinkDB
All DBs
Position
1:complement(7587904..7592149)
Genome browser
AA seq
1036 aa
AA seq
DB search
MGKKVKKKTRSSVKEKSGPSMSPTTVPNDDTSNAETTVDAVVVVKDRGVCSHVDKGINLD
KLSAKLRSSESNKCEDCRGNMADRRSKKGQGKHGKKGGTKALWVCLECGHYACGGIGLPT
TPQSHALRHSKQNHHPLVVHYENHHLLWCFPCGKLVLGENPEDHKHKEILSEVVKLLKGQ
PGEGSTVDVEDVWFGSASVTSAVKSDYSVSTAGKAGYSIRGLSNLGNTCFFNSVMQNLFA
INSLRDYFFKLDESVGPLSAAMRKLFLETSNEGGSKGVLNPRSLFGVLCNKSPQFRGYQQ
HDSHELLRCLLDGMSTEELKFRKRNESCEVSVKDQTFVDGFFGGKLSSTVSCLECCHAST
IYEPFLDLSLPVPTKRPPPKRTQPPLRGKKPKLFPKRSARNFSKGSKESNISPRSVLDQS
ISGNSSVEVHSIAQPAEPLALALVDSAFSDSTGSCSVALDMGLSAEDLSAFQNPNSQPAS
QAVVEQTISSDAFSWLDYLDPCPTSEQGNAASETDDTSAIDDSAKEDVLLQDTSSTAASD
SRFESNLENIAPEIPLGNAKNYDAPEPDAVAQEQNASLQFEDEQNVKPDSDGRIAPEGSL
TEDRFECDGGKDHSSPSCSQICAEDSNASCRDNDSSSQNLDPKVMSSQNQEAATSSVDVT
GADTEVSLAIVGNEQESLDFDGFGDMFNEPEESSGAKSLDNPGPVAKNGVNGNNTSESDA
DEVDNADAPVTVESCLAFFTKPEFLSKDEHAWQCDNCSRILREQRAKSRKFKNPKSGDVP
NGCEDTHPSSDGKTYDTEKSMNSKAEVDPSDGGSLPHNEDILENGRCKVGNYVVSEINGT
EIQSENVELQATSSCPGSLEGSDLSNRSLDPHQGECDSEKDVSMGNELQSVKCETEVSEH
EDVDSEKLKVKRDATKSILISKAPAILTIHLKRFSQDVRGRLSKLNGHVSFKESIHLKPY
MDPRCSEDNCTPSYRLVGVVEHLGTMRGGHYVAYVRGSPGYGDDGAWYHASDAYVRQASL
DEVLRSEAYILFYERT
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaaggtgaagaagaaaacgagaagttctgtgaaagagaaatcgggtccctcg
atgtctccgacaacagttcccaacgatgacacgagcaatgctgaaacaactgttgatgca
gttgtggttgtcaaagataggggagtgtgttcccatgttgataaaggtatcaacttagac
aaactttctgccaaactgcgatcttcagaatccaacaagtgtgaagattgtcggggaaat
atggctgatagacgatcaaagaaagggcaaggtaaacatgggaaaaaaggagggacgaaa
gcactttgggtttgtttagaatgtgggcattatgcctgtggaggcattggattgccaact
acgcctcagagccatgctctcaggcattcgaaacagaaccaccatcctttggtggtccat
tatgagaatcatcacttgctttggtgtttcccgtgtggaaaacttgttcttggtgaaaat
ccagaagaccataagcataaagagatcttaagcgaggttgtgaaattgctgaaaggacaa
ccgggtgaaggatcgactgtagatgttgaggatgtctggtttggcagtgctagtgttaca
agtgcggtgaaatcagattactctgtaagcaccgctgggaaagctggctattcgattagg
ggattgagtaatttggggaatacttgtttctttaactcggtcatgcagaatctatttgcg
ataaatagcttgcgtgattatttcttcaagttagatgaatctgttggtcctctaagtgct
gctatgagaaagcttttcctcgagaccagcaatgaaggtgggtcaaaaggggtactcaat
cctagatccttatttggtgttctctgtaacaagtctccacagttcaggggatatcagcaa
cacgatagtcatgagcttcttagatgtttgcttgatggcatgtcaacagaagagttgaaa
tttagaaagcgcaatgaatcttgtgaggtttcagttaaggatcagacatttgtggatggt
ttctttggtggaaaactttctagcaccgttagttgtctggaatgttgccacgcatcaact
atttatgaaccgtttttggatctctccttgccagttcctaccaagaggcctcctcccaaa
aggacccaacctcctcttcgaggcaagaaaccaaaactgtttccaaagagaagcgccagg
aatttctccaagggtagcaaagaatcaaatatttcaccaagaagtgttcttgaccaatca
atcagtggcaactcttcagttgaagtgcattctatagctcagccagcagagcctttggcc
cttgcattggttgattcggcattttcagattccactggttcctgcagtgtagctcttgat
atgggtttatctgctgaggatctttctgctttccagaatcccaatagccagccagcgagt
caagcagttgtagagcagacaatctcttctgatgccttttcatggttagattaccttgat
ccgtgtccgacatcagaacagggcaatgctgcctcagaaactgatgatacttcagcaatc
gatgattctgcaaaagaagatgttctactgcaggatacctcatcgactgctgcatcagat
tctaggtttgagagtaatttagaaaatatagctccagaaatccccttaggcaatgccaaa
aactatgatgcccctgagccggatgctgtagcccaagaacagaatgcttctctccagttt
gaggatgagcaaaatgttaaacctgattctgatggacgtattgcgcctgaaggttctctt
actgaggaccgttttgagtgtgatggtggtaaagatcacagctctccttcatgcagtcaa
atttgtgcggaagattcaaatgcttcatgtagggataacgatagttcgtcacagaatctg
gatcctaaagttatgtcaagtcagaatcaagaagctgctacatctagtgttgatgtgacc
ggagcagacactgaggtctcattagccatagttggaaacgaacaagaatctttagatttt
gatggatttggagacatgttcaatgaacctgaggagtcttcgggtgctaagtccttggac
aatcctggtcctgtggctaaaaatggagtaaatggaaataatactagtgagtctgatgcg
gatgaggttgataatgccgatgctccggtgactgtcgagagctgtttggctttcttcaca
aagccggaatttctttccaaggacgaacatgcttggcaatgtgataattgttcaagaatc
ttacgagaacaaagagcaaaatcgaggaaatttaaaaatcctaaatctggtgatgtgccc
aacggttgtgaggatacacatcctagcagtgatggaaaaacttatgacacagagaaaagt
atgaacagtaaggcagaagttgatccttctgatggcgggtcgctaccccataatgaggat
attttggagaatgggagatgcaaggttggaaactacgtggtaagtgagataaacggtact
gaaatccagtcagagaatgtggaactgcaggccacaagttcatgtcctggttcgttagaa
ggttcagatttaagtaatcgaagtcttgatccacatcaaggagaatgtgattctgaaaaa
gatgtgtctatgggaaatgagttgcaatctgtgaagtgtgaaacagaagtcagtgagcac
gaggatgtagactcagagaaattgaaagtgaaaagggatgcaacgaagagtatactaatc
agcaaggctccagctattctaacaatccacctcaagaggtttagccaagatgtgagaggg
cgcttgagtaaattaaacggccacgtgagtttcaaggagtcaattcatctcaagccttac
atggatcccaggtgcagcgaggacaactgcacaccctcataccgtctagttggggtcgtg
gagcatctagggacaatgaggggtggccactatgttgcgtatgttagaggtagccccggt
tacggggatgatggcgcctggtatcacgcgagtgatgcttacgtgcgccaggcttctctc
gacgaagttctgcgctctgaagcttatattttgttctatgaaagaacttaa
DBGET
integrated database retrieval system
