Salvia hispanica (chia): 125200934
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Entry
125200934 CDS
T09851
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
shis
Salvia hispanica (chia)
Pathway
shis04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
125200934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125200934
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125200934
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
Motif
Other DBs
NCBI-GeneID:
125200934
NCBI-ProteinID:
XP_047954728
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All DBs
Position
1:complement(16354343..16358945)
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AA seq
590 aa
AA seq
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MDPEPKKGDDSPSNSGNSHGPLHPQSPFPDEVLEKVLSFVDSHKDRSSISLVRKDWYNAE
RWTRSKLFIGNCYAVSPEIVARRFRRIKSVTLKGKPRFSDFNMLPLDWGANVYPWLVMFA
KVYPFLEELRLKRMTITDEGLELLAKSFPSFKALSLSSCDGFTENGLKAIASHCRNLTEI
NIQDSITEDVGGGWLSCFPENFSSLEILNFSSLNSDVNFDDLERLVSRCKLLRVLKVNES
ITLDELQRLLVHAPRLTELGTGSFLQELTPRQYEDIETAFCNCRNLQVLSGLWEATSVYL
PLLYGACASLTFLNLSVAPLQSGEFAKFLAHCPNLRCLWVIDTVEDKGLEAVGLSCPLLE
ELRVYPADPYDRDHRDGVTELGFLAVSRGCPKLHYVLYFCRRMTNAAVVTIVQNCPNFTH
FRLCIMTPGQPDYLTNEPMDEAFGAVVKTCTKIKRLSVSGLLTDRTFEYIGKYAKDLETL
SVAFAGSSDWGMQCIMEGCPKLRKLEIRDCPFGDAALLSGREKYEMMRSLWMSACSVTMK
GCKLLARESPRLNVEVIREEGGDEDQALKVYVYRSVAGPRKDAPPFVLTL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggatccagaaccgaagaaaggggatgattcgccatcgaactctggcaactctcatgga
ccactccaccctcaatcaccattcccggatgaagtgttggagaaagtcctgtcgttcgta
gattcgcataaagacaggagctcaatctcgcttgtgcgcaaagattggtataacgctgag
agatggacaagatcaaagctttttataggaaattgctatgctgtgtcaccagaaattgtg
gctaggaggttccggagaattaagagtgttacgcttaaagggaagccaagattttcggat
tttaatatgttgccactggactggggtgctaatgtgtacccttggttggttatgtttgcc
aaagtttaccctttcttggaggagctgaggcttaagaggatgaccatcaccgatgagggc
ctggagctcttggcgaagtcattccctagcttcaaggccttatctttgtcaagttgtgat
ggattcaccgaaaatgggcttaaagcaattgccagtcattgcaggaacttgactgagatc
aacatacaggacagtataacagaggatgtcggtggaggttggttgagttgcttcccggaa
aacttttcttcgctggaaatactaaacttctctagtcttaatagtgatgtaaactttgat
gacctggagagacttgttagccggtgcaaactattgagagttctgaaggtcaacgagagc
attaccttggatgaattgcaacggctgcttgtgcacgctcctagactaacagagctcggc
actggctccttcctgcaagaactcacacctcgccaatatgaagacattgaaactgcattt
tgtaattgtagaaatctccaggttctttcgggtttgtgggaagcaacttccgtatatctc
cctcttctttatggagcttgtgccagcctgactttcttgaacttgagcgttgcgcccctc
caaagtggtgaattcgcaaagtttcttgctcactgccccaatttacgatgcctttgggtc
attgatacagtcgaagacaaggggctcgaggctgttggtttgagctgtcccttactcgag
gagctacgagtctaccctgctgatccatatgaccgggatcatcgtgatggagtgacagaa
ttgggtttcttggcagtgtctcgtggatgccccaaactccactatgttctctacttctgt
aggagaatgactaatgctgctgttgtcaccatagtacagaattgccccaatttcactcac
ttccgtctatgcattatgaccccgggccaaccagactatctcacgaacgaacccatggat
gaggcctttggcgctgttgtcaaaacctgcacgaaaatcaagaggctttcagtttcaggc
cttctaactgaccggacatttgagtacattggcaagtacgcgaaagatcttgagacgctg
tctgtggcctttgctggaagcagtgattgggggatgcagtgtatcatggaaggctgtccc
aagctgaggaagctcgagatcagagattgcccctttggagacgctgccctgctgtctgga
cgagagaagtatgagatgatgcgatcgttgtggatgtctgcgtgcagtgtgaccatgaaa
ggctgcaaactgctcgcgagggagtctccaaggctcaacgttgaggtgatacgagaggaa
ggaggggatgaagatcaagccctcaaagtctacgtctatcgctctgtagccgggccaagg
aaggatgccccgccattcgttctcacactttga
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