KEGG   Salvia hispanica (chia): 125200974
Entry
125200974         CDS       T09851                                 
Name
(RefSeq) histone deacetylase 19
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
shis  Salvia hispanica (chia)
Pathway
shis03082  ATP-dependent chromatin remodeling
shis03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    125200974
   03083 Polycomb repressive complex
    125200974
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:shis03036]
    125200974
Enzymes [BR:shis01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     125200974
Chromosome and associated proteins [BR:shis03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     125200974
   HDAC complexes
    Sin3A-HDAC complex
     125200974
    BRAF-HDAC complex
     125200974
    REST complex
     125200974
    SHIP complex
     125200974
    MiDAC complex
     125200974
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     125200974
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    125200974
  Chromatin remodeling factors
   NuRD complex
    125200974
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 125200974
NCBI-ProteinID: XP_047954784
LinkDB
Position
1:complement(49790002..49794301)
AA seq 464 aa
MDTGGNSLPSGADGVKRKVSYFYDPEVGNYYYGQGHPMKPHRMRMTHALLAHYGLLQHMH
VLKPNPARDKDLCRFHADDYISFLRSITPETQQEQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHGHCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDIGYGKGKYYSLNVPLDDGI
DDESYQSLFKPIMGKVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGMELDDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNSRHLLEEIRSKLLENLSSLQHAPSVPFQERPPDSEMPEMEEDRDGEDERYDPDSDMDL
DDERKPLPGRAKSEFSEPEPKDMDVVKEDEPNREVDLKCSEPLA
NT seq 1395 nt   +upstreamnt  +downstreamnt
atggataccggaggcaattctctgccttctggagccgatggggtcaaacggaaagtgagc
tatttctacgacccagaggtcgggaactattactatgggcaaggtcacccgatgaagcct
cacaggatgcgcatgacgcacgcgcttctcgcacattatggattgttgcagcatatgcac
gtcctgaagccgaatcctgctagggacaaagacctttgcagatttcatgctgatgattat
atttcttttctgaggagcatcacaccggagacgcaacaggagcagctcaggcagctgaag
aggtttaatgttggcgaagactgtcctgtatttgacggtctctactcgttctgccagact
tatgcgggtgggtcggttggtggggccgtgaagctaaatcatggacattgtgatatagca
gtgaattgggctggtgggttgcatcatgccaagaaatgcgaggcttctggtttttgctat
gtgaatgacattgtgttggctatcttagaacttctaaaagttcatgagcgtgttctgtat
gtagacattgatattcaccatggtgatggagttgaggaggcattttacactacagacagg
gtgatgactgtttcttttcataaatttggtgattattttcctggtacaggcgatgtacga
gacattggatatggaaagggaaaatattactctcttaatgttcccttggatgatggaatt
gatgacgaaagttatcagtctctgtttaagccaataatgggaaaggttatggaggttttt
aaacctggtgctgtagtattacaatgcggggcagactctctgtctggagatcggctagga
tgctttaatctctccatcaaaggtcatgctgagtgcgtgaagtttatgagatcattcaat
gtgcctctactgttgttgggtggtggcggctacactatacgtaatgttgctcgttgctgg
tgttatgagacaggtgtagcacttggtatggaacttgatgacaagatgccacaacatgag
tactatgaatattttggccctgattatactctacatgttgctccaagtaacatggaaaat
aaaaactcccgccatttactggaagagatcagatcaaagcttcttgagaatctctcgagc
cttcagcatgcaccaagtgtcccatttcaggagcggccaccagatagtgaaatgccagag
atggaagaagatcgtgatggagaggacgagagatatgaccccgattctgacatggatctt
gatgatgaacggaagcctctaccaggcagagcgaagagtgaattttctgaacccgaacca
aaagatatggacgtggtcaaagaggatgagccgaatagggaagttgacctgaaatgctct
gagcctcttgcctaa

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