Salvia hispanica (chia): 125201084
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Entry
125201084 CDS
T09851
Name
(RefSeq) vacuolar sorting protein 3 isoform X1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
shis
Salvia hispanica (chia)
Pathway
shis04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125201084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125201084
Membrane trafficking [BR:
shis04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
125201084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Vps39_C
CNH
Vps39_1
Clathrin
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
125201084
NCBI-ProteinID:
XP_047954953
LinkDB
All DBs
Position
1:complement(17281827..17288039)
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AA seq
958 aa
AA seq
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MAVKPKSRTVLEPFAQSAVDSAASPIKHAALSKLSDDQSLIYIANLSGVLSLYSLRTSPP
QIAFVRRLALPGTGALSSILPLVHIGKVIVLVDGYLYLIDSNLAETPKRIALFRGVTAIS
RKFRSRSCSSESLHSNGVAQADYVHRNGDGNDVKSFFAVGIGKKLVLAELVLGGSLVILK
EIQGVFDGFITTVQWIDDSVFVGTKTGYYLYNCVNGRCELIFSLPDSSSLPRLKLLAKES
RVMLMVDNVGIVVDLVGQPVGGSLVFKEAPDSIKEIGSYVIAARNLTLEVYHKKTGFCVQ
RLTFGNGGAGPCMLADEESENGKLVAVATSLKLICYWKVSGEEQIKDLLRKKSFKEAISL
VEELENDDEMTKEMLSFVHAQVGFLLLFDLHFKEAVDHFLLSENMQPSELFPFIMPDPNR
WTLLVPRNRYWGLHPPPTPLENVIDDGLTAIQRAVFLKKAGVESAVDDEFLLNPPTRADL
LESAIENMIRYLQTCRGRDLAISVKEGVDTLLMYLYRARNCVDDMERLASSENCCVVEEL
EALMNESGHLRTLAFLYAGKGMSAKAVSTWRVLARKYSSGSYRNEQSEEIDLQDPTRRFI
SNRETAAIEASKILEESSDQDLILQHLGWIADISQVLAVQILISEKRSDLLSPDEVIAAI
DPKKVEILQRYLQWLIEDQDSEDLQFHTTYALLLAKSALETYDEELSTQNVLSEMNVSEN
GRSSIFDTPVRERLQIFLQSSALYDAEEVLDMIEESELWLEKAILYRRLGQEALVLDILA
LKLENFEAAENYCAEIGRPDAYMQLLDIYLDPKDGREPMFKAAVRLLHNHGEMLDPLKVL
ERLSPDMPLQLASDTILKMLKARQHHRLQGKIVHKMSHALNVDASLARLEERSRLVQIND
ESTCDSCHARLGTKLFAMYPDDSVVCYKCYRRQGESTSVSGRDFKREILLKPGWLVTR
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggctgttaaacccaagtcccgcacagttctcgaacccttcgcacaatccgccgtcgac
tccgccgcctctccgatcaaacacgccgctctctccaaactctccgacgaccaatctctg
atctacatcgccaatctctccggcgtcctctcactctactcgctgcgaacctccccgccg
caaatcgccttcgtcagacgcctcgcgctgcccggcaccggcgcgctgagctcgatcctc
cccctcgttcacatcggtaaagtcattgtcctcgttgatggatatttatacctaattgat
tccaatttagctgaaacgcctaagagaattgctctatttagaggagtcactgcgatttct
cggaaatttcgaagtcgaagctgtagttcggaatctcttcatagcaatggcgttgctcaa
gctgattatgttcatagaaatggcgatggtaatgatgtgaagagtttcttcgcggttggg
attgggaaaaaattggtgttagcggaattggttttgggtggctctttggtgatattgaag
gagattcaaggggtttttgatggatttattacgactgtgcagtggattgatgattctgtg
tttgttggtaccaaaactgggtattatttgtataattgtgtgaacgggcggtgcgagctg
atcttttcactaccagattcgtctagtttgccgagattgaagttgctggcaaaggagtcg
agggtgatgttaatggttgacaatgtagggattgttgtggacctggtggggcagcctgtg
ggaggcagcttggtgtttaaggaggctcctgattcgattaaggagataggaagttatgtg
attgctgcgaggaatctgacgttggaagtgtatcacaagaaaacgggattctgtgttcag
aggcttacgtttgggaatggaggcgcagggccgtgcatgctggcggatgaggagagcgag
aatgggaagcttgttgcagttgcaacgagtttaaagctgatctgctactggaaagtttct
ggagaagagcaaattaaagatctgctcaggaaaaagagcttcaaggaagccatctccttg
gttgaagagctagagaacgatgatgagatgacaaaggagatgctctcgtttgtccatgca
caggtgggattcctgttgctatttgatttgcatttcaaggaagcagtagatcacttcttg
ctttcagaaaacatgcagccttctgaactttttccatttatcatgccagacccaaaccgc
tggacactgctggtcccaagaaatcggtattggggtttgcatcctcctccaacacctctt
gaaaatgtaatagatgatggattgacagctattcaaagagctgtttttctaaagaaggca
ggtgtagagtctgctgttgatgatgagtttcttctaaatcccccaacaagagctgatctg
ttagagtctgccatagagaacatgataagatatttgcaaacatgtcgtggaagagatcta
gccatttcagtgaaggagggagttgacactcttctgatgtatctttacagagctcggaat
tgtgttgatgacatggaaaggcttgcttcttcggagaactgctgtgtagtggaggagcta
gaagcactaatgaatgaatctgggcatttgcgaacacttgctttcctttatgctggcaaa
ggaatgagtgctaaggctgtttctacttggcgtgtgttggccagaaaatattcgtcagga
agctatcgtaatgaacaatctgaggaaattgatttacaagatcccactagaaggtttatc
tcaaatagggagactgcagcaatagaggcatctaagattctcgaggaatcatcagaccag
gatttgatacttcagcacctcggatggattgcagatattagccaggtgcttgcagttcaa
attctgatatcagaaaaaaggagcgatttactatcaccagacgaagttatcgctgcaatt
gatcccaaaaaagtagaaattcttcaaagatatctccagtggttgattgaagaccaagac
tctgaggacctgcagttccatacaacatatgcactcttgcttgcaaagtcagcacttgaa
acttatgatgaggagctttcaactcaaaatgttctcagtgagatgaacgtgtctgaaaat
ggaaggagttcaatttttgatactcctgttagggaaagactccagatattcttacagtca
tcagccctatatgatgcagaagaggtcctcgatatgattgaagagtcagaactttggctt
gaaaaggctattctttataggaggcttggccaagaagccctcgtgcttgatattttggct
ttgaaactggagaactttgaagctgctgaaaactactgcgcagagattggtagaccagat
gcttatatgcagttgctcgacatatatttggatcctaaggatggcagagagcccatgttc
aaagccgctgtccgtcttctccacaatcatggagaaatgctagatcctttgaaagtgctc
gagagattatcaccggatatgcctcttcagcttgcttcagatacaatattaaaaatgtta
aaagcccggcaacatcatcgactgcaaggaaaaattgttcacaagatgtctcatgccttg
aatgttgatgcgagtttagcaagactggaagagaggtcccgccttgtgcagattaatgat
gaaagtacttgtgattcttgccatgctcgtctcggtaccaagctgtttgcaatgtaccca
gacgattctgttgtttgttacaagtgctaccgccgtcaaggtgagtccacttcagtcagt
ggccgtgatttcaagagagagatattgcttaaacccggatggctggttactcgatga
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