Salvia hispanica (chia): 125201115
Help
Entry
125201115 CDS
T09851
Name
(RefSeq) protein transport protein SEC23
KO
K14006
protein transport protein SEC23
Organism
shis
Salvia hispanica (chia)
Pathway
shis04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125201115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125201115
Membrane trafficking [BR:
shis04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
125201115
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
125201115
NCBI-ProteinID:
XP_047955000
LinkDB
All DBs
Position
1:complement(4490678..4494659)
Genome browser
AA seq
766 aa
AA seq
DB search
MDFTELEAIEGLRWPWHSWPLSKPEVSALVVPLSVMCTPLTPFTELPILAHDPVNCSQCA
AVWNPYSRVDYTSKIWICPFCYRRNPFPRSYDHINENNIPAELFPTYSTVEYHLGPAPRS
NSDSFSNFPAYSGLERSGAGVGAGPAFVFVVDGCSSEEDLGALKSELLHIIARLPENALV
GLVVFDAMVRVYDLAFTDCLRVVVFHGGREVSSEKAKELLGLHHMKQSIGKTSSVQKQGF
LVPVSEYEFNITTAIEEIHSSPVVKPGHRPLRCTGVAIAVAIGLLEGCLINTGSRVMVFT
TGPATVGPGMIVDSDFGSAIRTHRDLNNGYASYHRKSFEYYKQISQRLSESSIVLDLFAC
SLDQVGAAELKDPVESSNGFMMLGESFESEEFRKSLRHMFDRDSDGNLEMAFDVTIEIVT
SKDVKICGALGPCISLQKKNDTVSEKVIGKGGTYIWKLGTVTSKTCIAFFFEVAGEQKSQ
PSSAFFIQFITQYRYSNMGVRKRVTTAARRWVVKHSPEIASGFDQEAAASVMARLAINKT
EEIFAHEVIRWLDKMLIRFSSKFGDYVPEDPLSFRLSTNFSLFPQFMYYLRRSQFMDVFN
STPDETAYFRLMLNREGVVNSLIMVQPTLFQYSFDGPPIAVVLDVCSISSDVILLFDSFF
HVVIHHGSKIAQWRKLGYDKDPSHESFRELLEAVELDAEQLMAGRIPVPKFVKCDQHSSQ
ARFLLAKLNPSVTQNSTYKEGSEFIFTDDISLQVFTEHLQALAVQG
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaccgaattggaagcgatcgagggtttgcgctggccgtggcactcatggccc
ctctccaagcccgaagtctcagctctcgtcgttccgttatcggtaatgtgcactccgctc
acgcccttcaccgagctcccgatcctagctcacgacccggtcaactgctcccagtgcgcc
gcggtctggaacccctactcccgcgtcgattacacctccaaaatctggatttgccccttc
tgctaccggagaaaccctttcccgagatcgtacgatcatatcaacgagaacaacatcccc
gcggagctcttccccacttacagcaccgtcgagtatcatctaggccccgcgccgcggtcg
aatagcgattcgttctcgaattttcctgcctattcgggtttggagaggagtggggctggt
gttggagctggaccggcgtttgtgtttgttgtggatggttgctcttcggaggaggatttg
ggggctttgaagagtgagttgctgcatataattgcgcgtctgccggagaatgctttggtt
ggactggtggtttttgatgcaatggtgagggtgtatgatttggcattcacggattgtttg
agagttgtggtgtttcatggagggcgcgaggtctcgtctgaaaaggccaaagagctcctt
gggctccatcacatgaagcagtctattggaaagacttcatcagtacaaaagcaaggcttt
ctggttccagtatccgaatacgagttcaatatcaccacagcaattgaagaaatccattct
tcacctgtggtcaagccaggacatcgacctttacggtgtacaggggttgcaatagcagtt
gctattggactgttagaaggatgccttataaatactggttcgcgtgtgatggtcttcaca
actggacctgcaacagttggccctggaatgattgttgactcagattttggcagtgctatt
agaactcaccgtgatctcaacaatggttatgcttcctaccatagaaaatcttttgaatat
tacaagcaaatatctcagagattatccgagtcatccatcgttcttgatctgttcgcctgc
tctctggatcaggttggagcagctgagttgaaagacccagttgaaagctccaacggtttt
atgatgttaggagagtcgttcgaatctgaggagtttagaaaaagcttgcgtcacatgttt
gatcgtgacagtgatggaaatttagagatggcttttgatgtgaccatagagatagtgact
tccaaagacgtgaaaatttgtggagcacttggaccttgcatttctctccaaaagaagaat
gatacagtgagtgagaaagtgattggtaaaggaggtacctacatttggaaactgggtaca
gtcaccagcaaaacatgcattgctttcttctttgaagttgcaggtgaacagaaatctcaa
ccgagctccgcatttttcattcagttcataacacaatacagatatagtaacatgggagtt
cggaagagggtgacaactgctgcaagaaggtgggtggtgaaacactcaccagaaattgct
tcaggattcgatcaggaagcagctgcttctgttatggctaggcttgccatcaataaaaca
gaagagattttcgcccatgaagtaatcagatggttggataaaatgctgatacgtttttca
tctaaatttggtgattatgtgccagaagatccattatccttccgcctttccacaaacttc
tccctctttccacagtttatgtattacttgagaagatcccagttcatggatgtcttcaac
agcactccagatgagacggcttatttccgcctgatgctgaaccgtgaaggggtggtgaac
tctcttatcatggtgcagccaaccctgttccagtattcatttgatgggccacctattgca
gttgttttggatgtatgctccatctcttccgatgtgatattactcttcgattccttcttc
catgtcgtcattcaccatggctctaagattgcgcaatggagaaagcttggctatgacaag
gatccgagccatgaaagcttcagggaactcttggaagctgtggagcttgatgccgagcaa
ctgatggctggacggatcccagtcccaaaattcgtaaagtgtgaccagcacagcagccag
gcaaggttccttcttgctaagctaaatccatctgtcactcaaaattcgacgtataaagag
ggttcggaatttatatttaccgatgatattagcttgcaagtgttcactgagcacttgcaa
gccctggctgtgcagggttga
DBGET
integrated database retrieval system
