KEGG   Salvia hispanica (chia): 125201132
Entry
125201132         CDS       T09851                                 
Name
(RefSeq) ras-related protein RABF1
  KO
K07887  Ras-related protein Rab-5A
Organism
shis  Salvia hispanica (chia)
Pathway
shis04144  Endocytosis
shis04145  Phagosome
shis04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:shis00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    125201132
   04145 Phagosome
    125201132
   04148 Efferocytosis
    125201132
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:shis04131]
    125201132
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:shis04147]
    125201132
   04031 GTP-binding proteins [BR:shis04031]
    125201132
Membrane trafficking [BR:shis04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    125201132
 Endosome - Lysosome transport
    125201132
Exosome [BR:shis04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   125201132
  Exosomal proteins of other body fluids (saliva and urine)
   125201132
  Exosomal proteins of colorectal cancer cells
   125201132
  Exosomal proteins of bladder cancer cells
   125201132
GTP-binding proteins [BR:shis04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    125201132
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase Gtr1_RagA GTP_EFTU MMR_HSR1 AAA_7 DUF3801 AAA_16 TniB
Other DBs
NCBI-GeneID: 125201132
NCBI-ProteinID: XP_047955036
LinkDB
Position
1:complement(21666128..21668568)
AA seq 201 aa
MGCASSAPARSAGQIGGVNIDNGGANDPKNLKVKLVLLGDSGVGKSCIVLRFVRGQFDPT
SKVTIGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVSIIVYDITSPES
FHKAQYWVKELQKHGSPDIVMALVGNKADLNEKREVPTQDGIDYAEKNGMYFIETSAKTA
DNINQLFEEIAKRLPRPAPPS
NT seq 606 nt   +upstreamnt  +downstreamnt
atgggttgcgcttcgtcagctccagctagaagtgctgggcagatcgggggtgttaacatc
gataatggtggggcgaatgacccgaagaacctgaaagttaagttggtgctgttaggtgat
tccggtgttgggaaaagttgcattgttcttcgatttgttcgtggccagttcgatccaacg
tccaaggtcaccatcggagcatcctttttgtctcagactatagccttacaggattctact
actgtgaaatttgaaatttgggacactgcagggcaagaaaggtatgcagctctggcaccg
ctgtattacagaggagctgcggtttccatcattgtttacgatataactagtccagaatca
tttcacaaggcccagtattgggtcaaggaattacaaaaacacggtagtccggatatagtc
atggctttagttggcaacaaagcagatctaaatgaaaaacgagaagtaccaactcaggat
ggaattgattatgcggagaagaatggaatgtattttattgagacatctgcaaagacggca
gacaacataaaccagctctttgaggaaatcgccaagaggctaccgcgtccagctcctccc
tcgtga

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