Salvia hispanica (chia): 125201161
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Entry
125201161 CDS
T09851
Name
(RefSeq) multiple RNA-binding domain-containing protein 1
KO
K14787
multiple RNA-binding domain-containing protein 1
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shis03009
]
125201161
Ribosome biogenesis [BR:
shis03009
]
Eukaryotic type
90S particles
Other 90S particles
125201161
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_ACIN1
DUF8400
RRM_PARP14_3
RRM_10
RRM_occluded
RRM_11
RRM_Rrp7
RRM_7
RBD_DEAH11
RBD_RDR6
Motif
Other DBs
NCBI-GeneID:
125201161
NCBI-ProteinID:
XP_047955086
LinkDB
All DBs
Position
1:complement(16842277..16847768)
Genome browser
AA seq
839 aa
AA seq
DB search
MSRICVKNLPKYAAEEHLREFFSQKGEVTDAKLMRTKDGKSRQFGFVGYRTESEAEEAIK
YFNKSFMHTARITCEIARKVGDPEAPRPWSRHSLKQKENLPAEDKKATGFKDPKAMEQDG
KSKKCIKDDGTDDPQFQEFLEVMQHRSKSKLWANDTVAAVSREKSGLVPDDNYKTEKGEE
YEFDGDLEESEGEIDAASKKIDKAQTLAHDEAVSDMDYFKSRIKKNWSDSESSDTEGSTD
GTDNSDSDNDESAACKVKRKCDPVEKTIETDVFAGEAENGFSKESKNSDEPSSSPKNDNA
EVLESTRLFIRNLPYTATEEELESHFSKYGAVSQAHIVIDKETRRSKGFAYVHFALPEAA
ARALEEMDSSIFQGRLLHVMLAKQKKPSYVQEIKNDEKPSSKTLKQKRTDERKASEAAGN
TKAWNSLFMRPDTVVENIARKFGISKSELLDRESDDLAVRIALGETQVIAETKKALSSAG
VNVSSLEEYAAGKTDGVKRSNHVILVKNLPYGSSESELSSMFGKFGSLDKIIIPPTKTMA
LVIFLEPAEARAAFKGLAYKRYKDGPLYLEWAPGNILSQTSAVDASKAGGELDAKKVVLK
HQIEDIAEEDADPDRIESRSLYVKNLNFKTSEESVKKHFAEYMKGGKILSVRIKKHVKNG
KTLSMGFGFVEFDSVDTALKVCKDLQGSVLDGHALILQLCHHKKDETIPKKIDNDSSTKL
IVRNVAFEATEKDLKQLFSPFGQIKRLRLPMRFGNHRGFAFVEFLTKQEARNALEALSNT
HLYGRHLVLERAKEGESLDELRARTAEQFAGSTKLNNKRKQLPLPLLDEGNVKLQRMEE
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgaatttgtgtgaaaaacttgcctaagtatgcagcggaggagcatcttcgagaa
ttcttctctcagaaaggggaagtgacggatgcaaagcttatgcgcaccaaggatgggaag
agccggcaatttggctttgtggggtataggacggagagtgaggctgaggaagctattaag
tattttaacaaatcttttatgcatactgccagaattacttgtgagattgctcggaaggtt
ggagatcccgaagctcctcgtccttggagccgacactcattgaagcaaaaggagaatttg
cctgcagaagataaaaaagcaactggttttaaagatcctaaagccatggaacaagatggg
aagagtaagaaatgtatcaaggatgatgggactgatgatccccaatttcaagagtttctt
gaggttatgcagcatcggagcaagtcaaaattgtgggcgaatgatacagtagctgcagtc
tctcgtgagaaaagtggtttggtgccagatgacaattacaagacggaaaaaggagaggaa
tatgaatttgacggagatcttgaagaatcagaaggagaaattgatgctgcatcaaaaaaa
atagacaaagctcaaactttggctcacgatgaagctgtatccgacatggattatttcaag
agcagaattaaaaagaattggtcagattcagaaagtagtgataccgagggtagtacggat
ggcactgataatagtgatagtgataatgatgaaagtgctgcatgtaaagtaaagagaaaa
tgtgatcctgttgagaagacaattgaaactgatgtttttgctggggaggctgaaaatggc
ttctctaaagaaagcaagaactcagatgaaccatcatccagtccgaaaaacgataatgct
gaagttctagaatctacccgtctgttcatccgcaatcttccctacactgccaccgaggag
gaactagaaagtcacttcagcaagtatggtgctgtatctcaagcccatatagttattgac
aaagaaacaagacgctccaaagggtttgcttatgttcattttgctctcccagaagctgct
gctagggctttggaagagatggacagctcaatttttcaggggaggctgttgcatgttatg
cttgctaaacaaaaaaagccttcttatgtgcaagagattaaaaatgatgaaaaaccatct
tcgaaaacacttaagcagaaaaggactgacgaaaggaaggcatcagaagctgccggaaac
acaaaagcatggaatagtttatttatgcgtcctgatacggtggttgagaacattgcacgc
aaatttggtatcagtaagagtgaacttctagatagagaatctgatgaccttgctgtgaga
attgcactgggggaaactcaggtcatcgctgagactaaaaaagctctatcaagtgctggg
gttaatgtttcctcattggaagagtatgccgctggtaaaactgatggtgtaaagagaagc
aaccatgttatattagtgaagaatttaccatatggttcatcagaaagtgaattatcaagt
atgttcggcaagtttggcagcttggataaaataattatcccccctactaaaaccatggct
ttggttatctttttggaacctgctgaagcccgtgcagctttcaaaggtttagcatacaag
cgttacaaggacggcccactgtacttggaatgggcacctggtaatattcttagtcaaacc
tcagctgttgatgctagtaaagctggcggtgaacttgatgcaaagaaagttgtgctgaag
catcagattgaagatattgcggaagaagatgctgaccctgataggatcgagtcacgctca
ttatatgtcaagaacctgaacttcaaaacatctgaagaaagtgtgaaaaagcattttgca
gagtacatgaagggaggaaagattcttagtgtcaggatcaagaagcatgtaaagaatggg
aagactctttcaatgggatttggtttcgtagagtttgatagtgttgatacagcattgaag
gtttgcaaggacctacagggatctgttctggatgggcatgccctcatcttgcaactttgc
catcataagaaagatgaaacgatacctaaaaaaattgataatgatagctcaacaaaattg
attgtgaggaatgtagcttttgaggcaaccgaaaaggatctcaagcaattatttagtccc
tttggtcagataaagagattgaggttgccaatgaggtttggaaaccatagaggttttgct
ttcgtagagtttctcacgaaacaagaagctcggaatgcccttgaagcgctctcaaacacc
catctctacggtcgtcacttggtactggagagggcaaaagaaggagagagcttagacgaa
ttgcgggcaagaacagccgagcagtttgcgggctctactaagttaaacaataaaagaaag
cagcttcctcttcccctactagatgaagggaatgtcaagcttcaaagaatggaagaatag
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