Salvia hispanica (chia): 125201176
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Entry
125201176 CDS
T09851
Name
(RefSeq) general transcription factor 3C polypeptide 3-like isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shis03021
]
125201176
Transcription machinery [BR:
shis03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
125201176
TFIIIC, fungi type
125201176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_8
TPR_14
TPR_19
TPR_7
TPR_1
TPR_17
TPR_9
TPR_12
TPR_11
TPR_16
TPR_CcmH_CycH
TPR_20
TPR_Slam
TPR_15
ARM_TT21_4th
PPTA
ARM_TT21_5th
Coatomer_E
DUF7017
PH_SLA1
TPR_10
PHM7_cyt
Dynactin
HAT_PRP39_C
SNAP
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
125201176
NCBI-ProteinID:
XP_047955109
LinkDB
All DBs
Position
1:complement(53052805..53059172)
Genome browser
AA seq
934 aa
AA seq
DB search
MEVQSSGTPPSAAEGAESCSALDMIEELDLREDEGKEEDGETSEVSEDGESEREEDYNFQ
FEGEMDPLSFVEGEDSSRVPLYEVFQQIEDQYKALAAKKRPSPHENESETLAKRLRQEEE
NAGATREEIEEAMNFGVRKRRRRSRKERRRGRRKGTKNKLNPEVTRKLGDATLHYAQGYF
DKAICLLHEVIRLAPNLSDPYHTLGLIYSATDDNKKAMIFYMIAAHLNPKDASLWKLLLA
KSIEHEDIKQAYYCLNKAIVADPEDIDLHSTRASLYVELEKYQKAAESYEQIARRCPDNI
EVLQKAAQLYQKCKQHERAVSMLEESLKRQKDAANIGVVDLLVSVLMDNDKYAIALEHIE
HTQKVYNTGKQMPLDLITKAGICHIHLGHKEKAEACFKVLNQEAAANNPHLIIDVADSLM
SVGHPESALTYYLMLEEDSEKYNGYLHLKIARCCVSLKQRGQAIEYYKKAIRKLHDSVDA
RMTLSSMLLEEGRDDEAISVLSPPVESADPDSKSDPRKLWHHSGKIKLKLSQIYKSKGLV
EAFVDVLFPVIHETLLVEQNQRKARSRPRLTGSVLSERTEVLKDPNSDRVLLGLPPLASS
AALSKAARAKKVLQKKAALKEAKRAEALAAGCDYNSDDSDDESQQVSMESPLPGFLNEEK
NHLLIVDLCKSLSSLRRYSSALGIVKISLKLDALPVQIKKELRTIGAQLEALIADPAHGW
DLVRDFVSRDPYSFSAWNHCYKVILRMNRLSRRNKLLHSMRVKHKDSIPPILITGHQFTM
ISQHQTAAREYLHAYKLMPDNPLINLCGGTALINLSLGLRLQNKHQTFLQGLAFLYNNLR
LCGDSQEALYNIARAYHHVGLVSLAAQYYEKALTTREKDYPIPTLPYENQNATKIKMPGY
CDLRREAAYNLHLIYKQSGAFDLARQVLKDHLVL
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggaggttcagagcagcggaactcctccttcggcggctgagggggctgaaagttgttcg
gctctggacatgatagaggagctagatttgcgagaggatgaagggaaagaggaagatgga
gaaaccagcgaggtttctgaagatggagaatcagagagagaagaagactacaattttcaa
ttcgaaggcgaaatggaccccctctcttttgtcgagggcgaagactcctcgcgtgtgccg
ctttacgaggttttccagcagattgaggaccaatacaaggctttggcggcgaagaaacgc
ccatctcctcacgagaatgagagtgaaacactggctaagagattgagacaagaggaggag
aatgctggagcgacccgcgaggaaattgaggaggctatgaactttggtgttaggaagagg
aggaggaggtcgaggaaggagaggcgaagaggaaggaggaagggaacaaagaacaaattg
aatcctgaagtgactagaaaacttggcgatgctacacttcattatgcacaaggttacttt
gacaaggccatttgtctgttgcatgaagtaattcgtcttgccccaaatctttcggatcca
tatcatacacttggtctgatatattctgcgacggatgataataagaaagcaatgattttt
tacatgattgctgcgcatttgaatccgaaggatgcttctttgtggaaacttcttcttgcg
aaatcaatagagcacgaagacataaagcaggcctattattgcctcaacaaagcaatagta
gcagatccagaagatattgatcttcattcaacccgtgcttcgctctatgttgagctcgaa
aagtatcaaaaagcagctgagtcctatgaacaaattgctcgccgctgtcccgataacatt
gaagttctgcagaaagcggcacagctgtaccaaaaatgcaagcaacatgagcgagctgtc
agtatgctggaggaaagtctcaagcgtcagaaggatgctgctaatataggtgtagttgat
ctcttggtgtcagttctgatggataacgataagtatgccatagctcttgagcatattgaa
cacacacaaaaggtgtataatactggaaaacagatgccactggatttaataacaaaagct
ggaatatgccacattcatcttggtcataaggagaaagcagaggcttgcttcaaagttctg
aatcaagaggctgcagctaataatcctcacctaatcatcgatgtcgcagactcactcatg
agcgtcgggcatcctgagtctgcattaacgtattatttgatgttagaggaagactcggag
aagtataatggctacctacacttgaaaattgcaaggtgttgtgtttctctaaagcaaaga
ggacaagcaattgaatattataaaaaagctattcggaaacttcatgatagtgttgatgca
cggatgacattatcgtctatgcttcttgaagaaggaagagatgatgaagcaatttctgtg
ctttctcctccagtagaatcagcagatcccgactcaaaatcagacccacggaagttgtgg
caccatagtggaaagatcaagttaaagctttctcagatctataaatctaaagggttggtt
gaggcttttgtggacgtgctttttccagtaattcatgagacattgcttgtcgaacaaaac
caacggaaggccagatcccgtccacggctgactggtagtgttctttcagaaaggacggaa
gttctgaaagatcctaactccgacagagtgcttcttggacttcctcctttagcttcttct
gcagctctgtccaaagctgccagagcaaaaaaggtgctccagaaaaaggctgcactcaaa
gaagcgaaacgagctgaagcattggctgctggatgtgattataacagtgatgattcagac
gatgaatctcagcaagtgtctatggagtctcctttgccaggctttttgaatgaagagaag
aatcatctgttgattgtagatttatgcaagtcattatcttcattgagaaggtattcgagt
gcactagggattgtaaaaatcagcttaaaactggatgcattacctgttcaaataaagaag
gagcttcggactattggagctcaattagaagctttaattgctgatcctgcacacgggtgg
gatttagtacgtgactttgtaagtcgagacccttacagtttttctgcttggaatcactgc
tacaaagtaatactcagaatgaatcgactatcaagacgcaacaaactccttcattccatg
agagtgaaacacaaagattctataccacctattcttattaccggtcaccagtttactatg
atcagtcagcatcagactgctgctcgagaatacttgcacgcctataaactgatgcctgac
aatcccttgatcaacctttgtggaggaactgccttgataaatttgtcccttggcctccga
cttcaaaacaagcaccagactttcttacaagggctcgcgttcctctataacaacttgcgc
ctttgtggagacagtcaggaggcattgtacaacattgctcgggcgtaccatcatgttggc
cttgtttctttggctgctcaatactacgagaaggcactgaccacccgcgaaaaggattat
cccattccaacgctcccgtatgagaatcaaaatgccaccaagatcaaaatgccaggctac
tgtgatcttcgtcgcgaagcagcttacaatcttcatttgatatataagcaaagtggggca
tttgatcttgctagacaggtcttgaaagatcatcttgtgttatga
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