Salvia hispanica (chia): 125201214
Help
Entry
125201214 CDS
T09851
Name
(RefSeq) cyclic nucleotide-gated ion channel 4-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
shis
Salvia hispanica (chia)
Pathway
shis04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
125201214
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shis04040
]
125201214
Ion channels [BR:
shis04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
125201214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
Motif
Other DBs
NCBI-GeneID:
125201214
NCBI-ProteinID:
XP_047955194
LinkDB
All DBs
Position
1:complement(19103315..19107831)
Genome browser
AA seq
660 aa
AA seq
DB search
MPNRRQQQGSGYNYATSSDSELEEEEELEEEEATNLEICGRDCGFRGRQWRLWGGVLDPR
AAWVQEWNRLFLLVCAVGLFVDPLFFYTLSISESCMCLFVDGWFAVTVTVLRCMIDALHL
WNVWLQFNMNRSPDDRRAHDRATVAFKYLKSRKGFSFDLFVILPLPQIVIWVIIPKLLER
GWTTVVMTVLLVMFVFQYLPKIYHSVCLLRRMQNFSGTYIFSSVWWGIALNMIAYFVASH
AVGACWYLLGIQRGARCLRDQCMTTKGCDIKMMACQHSIYYGNKDLISDRTRFIWGENRH
ARSSCLQNYDNFDYGVYKWTVQLVTNNNRLEKVLFPIFWGLMTLSTFGNLESTTDWLEVV
FIIIVLTTGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRKRRLPQAFKQRVRN
YERQRWAAMRGVDECEMTRNLPEGLRRDIKYHLCLDLVRQVPLFQHMDNLVLENICDRVK
SLIFTKGETITREGDPVQRMLFIVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLR
RPFVERLPPSSSSLVTLETTEAFGLEAEDVKYVTQHFRYTFVSEKVKRSARYYSPGWRTW
AAVAIQLAWRRYRHRLTLTSLSFIRPRRPLSRCSSLGEDRLRLYTALLTSPKPNHDDFDF
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgccgaatcgccgccagcagcaaggctccggctacaattacgccaccagctccgattcc
gaattagaagaggaagaggaattggaagaagaggaagctaccaatttggaaatctgcggc
cgcgattgcggattccgcggccgccagtggcggctctggggcggagtcctcgaccccagg
gccgcgtgggtgcaggagtggaaccggttattcctcctcgtctgcgccgtggggctgttt
gtggacccgctcttcttctacacgctgtcgataagcgagagctgcatgtgcctcttcgtc
gacgggtggttcgccgtcaccgtcaccgtcctccgctgcatgatcgacgcgctgcacctc
tggaacgtgtggctgcagttcaacatgaaccgcagccctgacgaccgcagagcgcatgac
cgcgccacggtcgccttcaagtacctcaagtcgcgcaagggcttctcgttcgacctcttc
gtcatcctccccttgccccagatagtaatctgggtgatcatcccaaagcttctagaaaga
ggatggacgacggtggtgatgacggtgttgttggtgatgttcgtgttccaatacttgccc
aaaatctaccactcggtatgtctgctccgccgcatgcagaatttctccgggacctacatt
ttcagctccgtttggtggggcattgctctcaacatgatcgcgtactttgtcgcatcccac
gctgtaggggcgtgctggtacttgctcggcatccaacgaggtgcgagatgcttgagggat
caatgcatgacgaccaaaggctgcgacataaagatgatggcatgtcaacattcaatttac
tatgggaataaagatctcattagtgatagaacgagattcatatggggagagaataggcat
gcgaggtcttcatgccttcaaaattatgacaatttcgactatggcgtttataagtggacc
gtgcagctcgtcaccaataataaccgtcttgagaaagtattgtttcctatattttgggga
cttatgactttgagtacttttgggaatctagagagcacgactgactggctagaagtggtg
ttcatcataattgtcctcaccactggacttttgcttgtcacaatgttgatcggtaacatc
aaggttttcttgcacgcgacaacgtcaaagaagcaagcgatgcagctgaagatgcgaaac
atagagtggtggatgagaaagaggcggctgccgcaggcgttcaagcagagggtgcgcaac
tacgagaggcagcggtgggctgcgatgcgtggtgtcgatgaatgtgagatgactcggaat
cttccggaaggcctcaggagagacatcaagtatcatctgtgtttggacttggtgaggcag
gtgccattgttccagcacatggacaatctcgtgctcgagaacatatgtgaccgagtcaaa
tctctcattttcacaaaaggagaaacgataacgagagaaggcgatccggtgcaacgaatg
ctcttcatcgtgcgaggccatctccagagcagccaagtcctccgcgacggcgtgaagagc
tgctgcatgctcgggccggggaacttctcgggggacgagctcctctcgtggtgcctgagg
aggccgttcgtcgagaggctcccgccgtcgtcgtcgtccctggtgacgctggagacgacg
gaggccttcgggctggaggcggaggacgtgaagtacgtgacgcagcacttccggtacacg
ttcgtgagcgagaaggtgaagcggagcgcgcggtactactcgcccgggtggcggacgtgg
gcggccgtggcgatccagctggcgtggaggcggtaccggcaccgcctcacgctcacgtcg
ctgtcttttataaggcctcggcggccgctgtcgaggtgctcgtcgcttggggaggatagg
ttgaggctttacacggctttgctcacttctcctaagcctaatcatgatgattttgatttt
tga
DBGET
integrated database retrieval system
