KEGG   Salvia hispanica (chia): 125201335
Entry
125201335         CDS       T09851                                 
Name
(RefSeq) DNA repair protein RAD5B
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
shis  Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:shis00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shis03400]
    125201335
DNA repair and recombination proteins [BR:shis03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    125201335
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN UBA_RAD5A zf-C3HC4_3 zf-C3HC4 ResIII zf-RING_UBOX DEAD zf-RING_2 zf-C3HC4_2 RING_XB3-XBAT31 Prok-RING_4 zf-C3HC4_4 zf-RING_5 zf-RING_4 zf-ANAPC11 zf_C2H2_ZNF598
Other DBs
NCBI-GeneID: 125201335
NCBI-ProteinID: XP_047955355
LinkDB
Position
1:4153768..4159762
AA seq 1198 aa
MDTALTGPEPMEAKVKMVKSMVGSEVSEPDVLKALSLSNNNVREAVDVILDSLHPHLAAR
ETLTSTGGRRVQVNSSRDFGEGVSVNVEKRDCGVVDKCDAGVVRVKEEIDVGVAEEKRGF
SDEKRAEIRVKEEPNVAIDVSIGRGEREGSVLTKCDAGVGAMEFLKVKEEPHVGFVEGEV
LKVKEEPDLGFGDEKKDQSCDEKSLVLVGKVEEEARHEPSSVMAAIRVKEEGQAESEVTV
TSRLRPEWEVKELVSVQPLSARKLSDDEYKKMQPGCDGHRAKKARTQENALSAVVIEDGD
FPEELGWLLVGRTVVTGLSTTKGRKLENNEIVHFMFPGPTTKTKLSTHFMSSKAAHAVSS
IVRFSTKRYGEIGRLPMEWAKCLIPLVNSSKVKVLGRCVAAPVNLCMMQEIMLYVSFYIH
ESVFSEVDKSWKLEATNIDTTIYPLLKLFQLLKVRPFQKAQFTPEELDSRKRLLQLDDDP
DNSASLLPSLKTRKGSQDQKIHENHEQVITEASLNRLVGAVDTYNLQEMEPAETLACDLR
PYQKQALYWMSELEKGVNSEESEKTLHPCWAAYRVCDERAPEIYVNQFSGEATTEFPTAM
QMARGGILADAMGLGKTVMTIALILSRRGHGIPDGQMVVAERGSNDSNNSHISSNSLRRK
RGGTLIVCPMALLSQWKDEFEAHSKPDSITVFIHYGGDRTSDPRVIAEADVVLTTYGVLT
AAYKSENTNSIYHRVEWHRVVLDEAHTIKSSKTIAAKAAFALTSYCRWCLTGTPLQNNLE
DLFSLLCFLHVEPWCNWAWWNKLIQKPYDNGDMRGLQLVKAILKPLMLRRTKESKDKHGR
LILVLPPTDVQTIECEQSEAEQDFYDALFKRSKVQFDQFVAQGKVLHNFANILELLLRLR
QCCNHPFLVMSRGDTEAYADLNKLARRFLQSQSDGGSGTGPSRAYVEEVVEGIRNGENTE
CPICLESSDDPVLTPCAHRMCRECLLSSWRTPAAGLCPICRQVISKADLITCPSGNKFRV
DVEKNWKESSKITKLLQCLEDIRSSGSGEKSIVFSQWTSFLDLLEIPLKRKNIKFLRFDG
KLAQKQRAKVLHEFAETTEKTVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMR
IHRIGQKLTVRVRRFIVKDTVEQRLQQVQARKQRMIAGALTDEEVRSARIEELKMLFR
NT seq 3597 nt   +upstreamnt  +downstreamnt
atggatacagcattgacggggccagagcccatggaggcgaaggtaaagatggtgaaatcg
atggtcggctctgaggtgtcggaacccgacgtcctcaaagctctgtcgctctccaacaac
aacgtgcgcgaagccgtcgatgtcatcctcgattcgctgcatccgcatttagcagcgcgg
gaaactctcacttccaccggtgggagaagagttcaggtgaattcatcgcgggattttggg
gaaggggtttctgtgaatgtggaaaagagggactgtggcgttgttgataaatgtgatgcg
ggtgttgtgagggtgaaagaggaaattgatgtgggggttgcagaggaaaagagggggttc
agtgatgagaaaagggctgaaattagggttaaagaggagcctaatgtggccatagatgtt
agtatcggaaggggtgaaagggaagggagtgttttgacaaaatgtgatgcaggtgttggg
gcgatggagtttctgaaagtgaaggaagaacctcatgtgggttttgtggaaggtgaggtt
ttgaaagtgaaagaagaaccggatttgggtttcggagacgaaaagaaagatcaaagttgt
gatgaaaagtcactggttttggtgggaaaagttgaagaagaggctagacacgagccgagt
tcggtgatggctgcgattagagtgaaggaggaggggcaggctgagtcagaagtaactgta
acgagccggttgagaccggagtgggaagtgaaggagttggtcagtgttcagccgcttagt
gcgagaaaattgtccgatgatgaatataaaaagatgcaaccgggatgtgatggccacagg
gctaaaaaggcgaggacgcaggagaatgccttgagtgctgtggtgatcgaggatggtgat
tttccggaggagctggggtggttgttggttgggaggacggtggtcacggggctgtcaacg
acaaagggcaggaaattggagaataatgagattgtgcattttatgtttcctggacctacc
acaaaaactaagcttagcacccattttatgagttcaaaggctgctcatgctgtctccagc
attgttcgtttctcgacaaagagatatggagagattggtcgtttgccaatggaatgggca
aagtgccttattccacttgtaaattcatcaaaggtgaaggttcttggccgttgtgttgct
gctccagttaatctttgcatgatgcaagagattatgttgtatgtgagcttttatattcat
gaatctgtcttttcggaagttgataagtcatggaagcttgaggctacaaatattgacacc
accatttatcctctcttgaagttgtttcaactgctgaaagtcaggccatttcaaaaggca
cagttcacaccagaagaacttgactccagaaagcgcttactacaattagatgatgatcca
gataattctgcatctctgttgccttcattgaagacaagaaagggctctcaagatcaaaag
atccacgaaaatcatgagcaagttattacagaagcatccttgaataggcttgttggtgct
gtagatacctataacttacaggagatggagcctgccgagactctagcttgtgatttgagg
ccataccagaagcaggctctttattggatgtctgaattggagaaaggtgtgaatagcgag
gaatcagagaagacacttcatccatgctgggcagcttatcgtgtgtgtgatgagagagct
ccggagatttacgtgaaccaattttctggggaagcaaccacagaatttccaactgccatg
cagatggccagaggagggattttggcagatgcaatgggacttgggaagactgtaatgaca
attgctctgatactatcaagaagaggacatggcatcccagatggccaaatggttgtagct
gaacggggttcaaatgatagcaataatagccatattagttctaacagcctgaggagaaag
agaggtggcaccctaattgtttgtccgatggctttacttagccagtggaaggatgagttt
gaagcccattcgaaaccagatagcatcacagtcttcattcattatggtggggacagaact
agtgaccctagggtgatagcagaagctgatgttgtcttgacaacatatggtgtactgact
gctgcgtataaaagtgaaaatacgaacagcatttaccacagagtagaatggcatcgtgtg
gttctagatgaagctcatacaatcaaatcatccaagactatagctgctaaggctgcattt
gcattgacctcatattgccgctggtgtcttactggcactccacttcagaacaatttggaa
gacttgttcagccttttgtgcttcttacatgttgaaccatggtgcaactgggcctggtgg
aacaagctgattcagaagccttatgataatggtgacatgagagggttgcaattggtgaaa
gcaatcctcaaaccccttatgttgaggagaacaaaggagtctaaggataaacatggaagg
ctcatacttgttctaccacctactgatgtccaaaccatcgagtgtgaacaatctgaagcc
gagcaggacttttatgacgctcttttcaagagatctaaagtacaattcgaccaatttgtt
gctcaaggaaaggttctccataactttgcgaatattctcgagctgctacttcggctgagg
caatgttgcaaccaccctttcctagttatgagtcgaggtgatacagaagcatatgcagac
ttgaacaaactggcaaggaggttcctccagtctcagtctgatggaggctctggaactggt
ccttctcgagcttatgttgaagaagttgtggagggtattcgcaatggtgaaaataccgaa
tgccccatttgcctagagtcctcagatgacccagtgttaaccccctgcgcgcataggatg
tgtagggagtgccttctctctagctggaggactccagctgccgggctctgccccatatgc
aggcaggtgatcagtaaagctgatctgatcacatgcccatctggaaacaaattcagagtt
gatgttgagaagaactggaaggaatcttcaaagataaccaaactcttgcagtgcttagaa
gatatacgcagctcgggttccggtgaaaagagcatagtattcagccagtggacttcgttc
ttggatctcttggaaattccactcaagaggaagaatatcaaatttttgaggtttgatggc
aagttggcgcagaaacaacgagcgaaggtcctccatgagtttgctgagactactgaaaaa
acagtactgttgatgtcgcttaaagcaggtggtgtgggtctgaatctgactgcagcttca
aatgtattcctaatggatccatggtggaatcctgcagtagaggagcaagcaatcatgcga
attcaccggattggccaaaagctgactgttcgtgttagaagattcattgtcaaggacact
gtggagcagagattgcagcaagttcaagcaagaaagcaacggatgatcgctggagcactg
accgatgaagaagtccgatcagccaggattgaggagcttaagatgctctttagatag

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