Salvia hispanica (chia): 125201354
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Entry
125201354 CDS
T09851
Name
(RefSeq) uncharacterized protein LOC125201354 isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
125201354
Enzymes [BR:
shis01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
125201354
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
DUF4198
Motif
Other DBs
NCBI-GeneID:
125201354
NCBI-ProteinID:
XP_047955387
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Position
1:complement(49018119..49025439)
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AA seq
676 aa
AA seq
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MLHIIFLMFNGFVRCFVKQPAAIYIILSLWLLRLDKMSGNGDLELRIHEHHIVIDNGILK
LTLSKPGGLIRAIQYNGIDNLLELQNEQLNGGFYDLNWSEEGANKTRGQFDVIQGKHFSV
VVENENQVELSFTRPWDPSVQGKQSPLSIDRRFVMLRDHPGFYSYAIFEHAEDFPGFNLN
TARIAFMLRKDKFHYMAVADNRQRYMPRPEDRLPGRGQNLSYPEAVLLVDPVEPEFKGEV
DDKYQYTLENKDNKVHGWICFDPPVGFWQITPSNEFRNGGPFKQDLTSHVNPTTLAIFGT
SHYAGVDLLLKFKDGEVWKKVFGPVFIYLNSVPEGEDPLTLWNDAKEQMKKEVEAWPYDF
PASEDFPKSHQRGEVKGKLLVYDRYVNEDKVPARGAYVGVAPQGHTGSWQRESKRYQFWT
TTDEKGYFCIPDIRAGDYNLYAWVPKFIGDYKYEVALNITPGSFIDVGELTFEPLRDGPT
VWEIGIANRTASEFYVPDPNPMYINKLYVNHPDRFRQYGLWERYADLYPDKDLVYTVGVS
DYTKDWFYAQVTRKIGDNEYKGTTWQIKFSIDWLIEGGIYKLRLALASVHNSNLQVRVND
ASANPPLFSTGEIGGDNAIARHGIRGIYWLFSVDIPAVKLIPGENTIYLTQTKSESPFQG
IMYDYIRLEGPSHIDT
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgctacacattatttttcttatgtttaatggttttgttagatgttttgtgaagcaacct
gcagcaatatatattatcctcagcttgtggctactaaggctggataagatgtctggaaat
ggggatttggagttacgcattcacgagcatcatatagtaattgacaatggaatacttaag
ctcactctgtcgaaaccggggggacttatcagagccatacagtacaatggaattgacaat
ttgctcgaacttcaaaacgaacagctcaatggcgggttttatgacctcaattggagtgaa
gaaggggctaacaaaacaaggggacagtttgatgtgattcaaggtaaacacttcagcgtt
gtcgtagaaaatgaaaaccaagtagagctttccttcacaagaccatgggatccttctgtt
caaggaaaacagtcaccactaagtatagataggaggtttgtgatgctccgtgatcaccca
ggattctactcttatgccatatttgaacacgcagaggactttcctggtttcaacctcaat
actgccaggattgcattcatgctcagaaaagacaagtttcattacatggctgtggcagat
aataggcagagatatatgcctcgaccagaagatcgactacccggaagaggtcaaaacctg
tcatacccagaagcagttctccttgttgatcctgtggagcctgaatttaaaggagaagtg
gatgataagtaccaatacacattggagaacaaagataataaggtgcatggttggatatgt
tttgacccacctgttggcttctggcaaattacacccagcaatgaattccgaaatggagga
cccttcaaacaagacctgacctcccatgtgaaccctaccactcttgcaatatttggcacg
tcacactatgcgggagtggatctgttactaaaatttaaagatggagaagtatggaagaaa
gtgtttgggcctgtatttatatatctcaattctgttccagaaggagaggacccccttacc
ctttggaatgatgccaaggaacagatgaaaaaagaagtggaagcatggccctacgatttc
ccagcttcagaggattttcctaaatctcaccagaggggtgaagtaaagggtaaactgctt
gtatatgataggtacgttaacgaggacaaagtaccagccagaggagcctatgttggtgtg
gcaccacaagggcatacgggatcatggcagagggaatccaagaggtatcagttttggacc
actactgatgaaaagggttacttctgcatacccgatataagagctggtgactataatctt
tacgcatgggtgcctaaatttattggagattacaagtatgaagtagcattaaacattacc
ccagggtcgttcattgatgttggtgagcttacatttgagccactgagggatggtcctact
gtgtgggaaattggaatcgctaatcgtactgcatccgaattctatgttcctgatcccaac
ccaatgtacatcaataaactatatgtaaatcatccagacaggtttagacaatatggacta
tgggagagatatgctgatctgtatccagataaagatttagtgtacacggtcggagtaagt
gactacacaaaagattggttctatgctcaggtgacaaggaaaatcggagacaatgaatac
aagggcacaacatggcaaatcaaattcagcattgactggttgattgaaggaggtatctac
aaactccggttggcacttgcatcagtccacaattctaatttgcaggttcgtgtcaatgat
gcttctgcaaatcctcccttgttttcgactggagaaatcgggggagataatgcaattgct
aggcacgggattcgtggaatctattggttgtttagtgtggacataccagctgtaaaactc
atacctggggaaaacaccatatacttgacacaaacgaagagtgagagcccgttccaaggc
attatgtacgactacattcgtcttgaaggtccttctcacatagatacttag
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