Salvia hispanica (chia): 125201464
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Entry
125201464 CDS
T09851
Name
(RefSeq) DNA replication ATP-dependent helicase/nuclease JHS1
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
shis
Salvia hispanica (chia)
Pathway
shis03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125201464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shis03032
]
125201464
Enzymes [BR:
shis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
125201464
DNA replication proteins [BR:
shis03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
125201464
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
125201464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dna2
AAA_12
AAA_11
AAA_30
AAA_19
UvrD-helicase
Viral_helicase1
Cas_Cas4
nSTAND3
ResIII
SLFN-g3_helicase
DUF7372
Motif
Other DBs
NCBI-GeneID:
125201464
NCBI-ProteinID:
XP_047955543
LinkDB
All DBs
Position
1:5339974..5351651
Genome browser
AA seq
1406 aa
AA seq
DB search
MAPRKRASSGGKKPNNPNREQQQSEPSKFGIQHFFERHSQTQIQKRCDDPTADSAANKNS
RIVGKPIAGRSKVGPENPCDAVESRTECVRGVNTRINSVNANDCVSRNDTSGGNVPVEDH
IGAVDVNNVEKTENLLKAEISSRSPDPRLDNLSPVVIDVEDNQLDVTPETSKSVSVKRFK
FSPGMLIKQTQDDTVDEVTWKISPVNERLHAMSKHLHGRISVLADSTRFNSMNFQECSQE
KVKISPNMSGKLEKWLSSPPLKPHRKSIICSDGLASRKVNHGLNLSCPGNHRNSNCTDKS
GLRDSQSPFTTPPSLSCCTGKAVEEVGDKGVPNQLGSRQHKKALIELLDQVEDVISVESS
SSKDAQSHLDVERYSKADVVVHRPTTHSEENRSTTYSNFSFLVLEVSEKRGLSGSSGGPP
SVFKVLRLLNEQNGAERSLQLWDAWYDSVVAPGDTVHVVGEFDSEGKCDVNREKNFFIVH
PDILVSGTRVSASFSCPRRTVLDERIKSTENSTAALIGTLLHQIYQAGLISESPTKESLE
EYARTVLHKSLENLYACGANENDIFKTMIAAIPKILNWISSFRDSQGSKSPTVDFNSDEG
LKKVKICEVIDIEEMVWGQRYGLKGMIDASLRVRTNTNSAEANEVIMPLEFKTGKGTSGQ
VAIEHTAQVMLYTLLMSERYMMNIECGLLYYLHTDETRGISVKRSDLMWLIMRRNELAND
LLKASTTQQFPPMLQNPNVCRSCRHLNACSVYHKANGGTVEGSGLGAMYESLVSHLTSTH
AIFLQKWERLIDLEAKHVEIAKKESWLSSSSRNDHHPISLSSLVLDNSDTSSERKMSRRN
RFVYRFVSPEQPNHDPLRASSPLEHMFRNGDYVVLSTEPDHLRVSNGIIEDIGNFHVSVS
LAKRLRLPGHSPRSMTEELCKQSWRIDKDEIMTSYAIMRFNLIQLFLQNESSTCLRKKVV
DLEMPRFDSGCILSQDPAISYVQSEKSLNDDQRRAILKILTAKDYALILGMPGTGKTSTM
VHAVKALLLRGASILLTSYTNSAVDNLLIKLKAQGVDFIRIGRNEAVHEEVQENCISVMN
MNSTQDIKERLEKVNVVAVTCLGITSPLLTNKRFDICIMDEAGQITLPVSLGPLAFASRF
VLVGDHYQLPPLVQSPEAKENGMSVSLFCRLSEAHPHAIAALHFQYRMCADIMELSNALI
YGNRLRCGSTEIENAKLKYRSSASSPAWLIKVLDPNQPVIFINTDLLPAYESNDRKALNN
PIEAHIIAEAVKLLVLRGIEGKAIGIITPYNAQANLIREAAPEGVEIHTIDKYQGRDKDC
ILVSFVKSSETPRNGTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLMIEKVE
ELCGMVVVSNKEIKYQPELRRCSHLI
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atggctccgcggaagagggcgagctcaggaggcaagaagccgaacaatccaaatcgcgag
cagcagcaatctgaaccgtctaaatttggtatacagcacttctttgagcgccactcccag
acccaaatccagaaaagatgtgacgaccccacagctgattctgccgcaaacaaaaactcc
cggatcgtaggtaagccgattgcgggtcggtctaaagtgggaccggagaatccttgtgat
gcagttgaatcgcggactgaatgtgtaaggggtgtaaacactagaattaattcggtaaat
gcgaatgactgtgtttctcgaaatgatacaagcggaggcaatgtgcctgtggaggatcat
attggagctgtagatgtaaataatgtggaaaagacggaaaatttgttgaaggctgagata
tctagtcgatcgccagatccacggctggataatttatcgccggtggtgattgatgttgag
gataatcaactggatgtgacaccagagacgtccaagtctgtctcggttaagcgtttcaag
ttttctcctggaatgctaatcaagcagacccaggatgacacggttgatgaggtgacatgg
aaaatttctccagtaaatgagaggctgcatgctatgtctaagcatttacatgggaggata
agtgtgttggcagattccactaggtttaactcaatgaattttcaagaatgctcacaggaa
aaggtaaaaatttctcctaacatgtcggggaagcttgagaagtggctttcttcacctcca
ctaaagccgcataggaaatccataatatgctctgacgggcttgcgtcaagaaaggtcaac
catggtcttaatttaagctgccctggaaatcatagaaattcgaattgcactgataaatct
ggattacgtgattctcagagcccattcactaccccaccctcactgtcttgttgcaccggc
aaggctgttgaagaagtgggtgacaaaggggtgcccaaccagttgggttcaagacagcac
aaaaaggctttgattgaactcttagatcaagtagaggatgtaatatctgttgaaagttca
tcatctaaagatgctcaatcacacttagatgttgagagatacagcaaagctgatgttgtt
gtacaccgcccaacaacacattcagaagaaaatagatccactacatactcaaatttcagt
tttcttgtattggaggtttcagaaaagcgcggactttctggatcatctggtggtcctcca
tccgttttcaaggtactacgcttattgaatgagcaaaatggagctgaacggtccttgcaa
ttgtgggatgcatggtatgacagtgtcgtggcgcctggagacactgttcatgttgttggt
gaattcgattccgaagggaagtgtgacgtcaatcgtgagaagaactttttcatcgtccac
ccagatatcttggtatctggaactcgggtttctgctagtttcagctgcccaaggcgcacc
gtcctggatgagaggataaaaagcacggagaattcaacagcagcattgattggtacctta
ttgcatcagatctatcaggctggcctcatcagtgaatcccccacgaaagaatccttagaa
gaatatgccagaacagtgcttcacaaaagtcttgagaatctctatgcatgtggagcgaat
gaaaatgatatcttcaaaactatgattgcagcaatcccaaaaatattgaattggatatcc
tcctttcgagattcacagggttcgaaaagcccaactgtagacttcaatagtgatgaagga
ctaaagaaggtcaaaatttgcgaggtaatcgacattgaagaaatggtctggggccaaagg
tatggattgaaaggaatgattgatgcttctctccgagttagaaccaacacaaattctgca
gaagctaatgaagtaattatgcctctggagttcaaaactggaaagggaacaagtggacag
gtagctatagagcatactgcacaagtgatgctatatactctcctgatgtcagagcggtac
atgatgaacattgaatgtggtcttctttattatcttcatacagatgaaacacggggaatc
tcggttaaaaggtctgacttaatgtggctcattatgcggcgcaatgaacttgcaaatgat
ctgcttaaggcatcaacaactcagcaatttccacctatgctacaaaatccaaatgtttgt
agaagttgcaggcacctgaatgcctgcagtgtttatcacaaggcaaatggaggtactgtt
gaaggaagtggactaggtgccatgtatgagtcgcttgtgtcccatttaacctcaacacat
gccatttttctccagaaatgggaaagactaattgatctggaggctaaacatgtggagatt
gcaaagaaggagagctggctctctagcagttctaggaatgaccaccaccccatttctcta
tcatccttggttcttgataattcagatacatcatcagagagaaaaatgtccaggagaaac
cgatttgtttaccgctttgtctctcctgaacaaccaaatcatgatccattacgtgcctcc
tctcccttagagcatatgtttcgaaatggagattatgtggtattaagcactgaaccagat
catctacgagtttctaatgggattattgaggacattggtaacttccatgtctctgtatct
ttggcaaagcgattaaggcttccagggcatagtcctaggtctatgacagaggaactctgt
aaacaatcctggcgaattgacaaagatgaaattatgacatcatacgcaatcatgaggttc
aatcttatccaactctttttgcaaaatgaaagtagtacttgtctgaggaagaaggttgtg
gatcttgagatgcctagatttgacagtggctgcatacttagtcaagatcccgccatttca
tatgtccagtcagagaaaagtttaaatgatgatcaaagaagagctatactcaagatactc
acagctaaggattatgctcttattcttggaatgcctgggacaggcaaaacttccaccatg
gtacatgctgtgaaggctttgctgctaagaggtgcatccattttgctcacatcctacaca
aattcggccgttgacaatttattaatcaaattgaaagctcagggcgtagatttcataaga
atcggaaggaacgaggcggtgcatgaggaagttcaagagaattgcatatcagtaatgaat
atgaatagcacccaggatattaaggaaaggctagaaaaggttaatgttgttgctgttact
tgcttgggaataacgagccctttgctaactaacaagaggtttgacatatgcatcatggat
gaagcaggacagataacacttccggtatccttgggtccactcgcatttgcttcaagattt
gttctcgttggggatcattatcaattacccccactcgtccagagtccagaggctaaggag
aatggaatgagtgtgagcctcttctgcaggctctcagaagcacatccacatgcgattgca
gctttgcatttccagtaccggatgtgcgcagacataatggaactctcgaacgccttgata
tatggaaatagattgcgttgtggttctacagaaatagagaatgcaaagctcaagtacagg
tcttcagcttcttcacctgcgtggctgattaaggttctggatccaaaccaacctgttata
tttatcaacacagatttgttgcctgcatatgagagtaatgaccggaaagctctaaacaac
ccaatcgaggcacatattattgcagaggccgttaaactcctggtacttagaggcattgaa
gggaaagctattggcattattactccttacaacgctcaggctaatctcattcgagaagct
gctcctgaaggtgtggagatacataccatagacaaatatcagggaagagataaggactgc
atattggtgtccttcgtgaagtcctctgaaacccctaggaacggcacatcttcgcttctt
ggagactggcacagaataaacgtagctcttacacgtgccaagaagaagttgatcatggtg
ggatcatgccgaactctgtcgaaagtgccattgctgaaactcatgattgagaaggtggaa
gagctttgtggaatggtggtggtttcaaacaaggaaatcaaataccagcctgagctaagg
agatgctctcacctcatctaa
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