Salvia hispanica (chia): 125201604
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Entry
125201604 CDS
T09851
Name
(RefSeq) uncharacterized protein LOC125201604
KO
K03504
DNA polymerase delta subunit 3
Organism
shis
Salvia hispanica (chia)
Pathway
shis03030
DNA replication
shis03410
Base excision repair
shis03420
Nucleotide excision repair
shis03430
Mismatch repair
shis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125201604
03410 Base excision repair
125201604
03420 Nucleotide excision repair
125201604
03430 Mismatch repair
125201604
03440 Homologous recombination
125201604
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
shis01009
]
125201604
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shis03032
]
125201604
03400 DNA repair and recombination proteins [BR:
shis03400
]
125201604
Protein phosphatases and associated proteins [BR:
shis01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125201604
DNA replication proteins [BR:
shis03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
125201604
DNA repair and recombination proteins [BR:
shis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
125201604
MMR (mismatch excision repair)
DNA polymerase delta complex
125201604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Ig_TR130_2nd
Motif
Other DBs
NCBI-GeneID:
125201604
NCBI-ProteinID:
XP_047955739
LinkDB
All DBs
Position
1:18573041..18576383
Genome browser
AA seq
493 aa
AA seq
DB search
MAETATLGMLEEIRSLVSDRLQVISYKWLSRNFSVSSNAAKRLLEEFVEQHGDGLAVIYS
LSGWLKNNPTTYHIRLVPSHMLSDAKEKFAGKCSVQVYSIQPCLPKDPAILWNHEFVQAE
DLFKQPLTVDNCLRDNRFCGVSNSSVTRTVGGTPSIPQAIAAPQSIQKKFMNAGSNAVKT
EGYVKPDLAQVSERDKVPRSLPNNKKGQNDQKSSGSGSSLASMWGRASAAPKPDACLVQA
DKARQGSSVSAEAQICARESAEHDISDDDDDGKAFSARRTSNGEGSRKRKVVFNYSDEED
EYENAINLGSPDPPKKSTLYSKESLNAFTTECNLSFGEKENKPKVQEEKKSDVKAKPKVK
EEKERDVKGMPKVKEEKESHVKANQHLGEKVATASDVPKRRKVVKTRIDERGREVTEVVW
EGEEQDTKSNNNSSAKIAGSNTVSNATNRPPVARKSPAVGNAAPANQPGKAGNKKAAAKD
PKQGNLFSFFKKV
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaaccgccactctcggaatgctggaagagattcgctccctcgtctccgatagg
cttcaagtgatttcatacaaatggctaagtcggaatttttcggtttcctccaatgctgca
aagagattgctagaggagttcgttgaacagcatggagatggattagcagtgatttactct
ttgtctggctggctgaagaataaccctacaacctaccatataaggcttgtccccagtcat
atgctttcagatgcgaaggaaaagttcgctggaaaatgttctgttcaagtatacagtata
cagccctgcctccctaaggatccagcaatactttggaatcacgagtttgttcaggctgaa
gatctttttaagcagccattgactgttgataattgtttgcgagataacaggttttgcggg
gtttcaaattcatctgttacgagaacagtaggaggaaccccttctattcctcaagctata
gctgctccacagtctattcagaagaaatttatgaatgctggttcaaatgctgtgaaaact
gaaggatatgtaaagccagatctagcacaggtatcagaaagagataaagttccccggtcg
ctccccaacaacaaaaagggccaaaatgatcaaaagtcttctggcagtggaagttcatta
gctagcatgtggggtcgtgcatcagcagcacctaaacctgatgcttgcttggttcaagct
gacaaagccagacaaggctcttctgtcagtgcggaagctcaaatttgtgctcgtgaatca
gctgaacatgatattagtgatgacgatgacgacggaaaagctttcagtgcaaggagaacc
tcaaatggtgaaggcagtagaaagagaaaagttgtattcaattactccgatgaggaagat
gaatatgaaaatgccataaatctagggtcacctgatcccccaaagaagtctactctatac
tcaaaagaaagtttgaatgctttcaccacagagtgcaatttaagtttcggggagaaggaa
aataagccaaaggtccaagaagagaaaaaaagtgatgttaaagctaagccaaaggtaaaa
gaagagaaagaaagagatgtaaaaggtatgccaaaggtcaaagaagagaaagaaagtcat
gtaaaagctaaccagcatttgggagaaaaggttgcaactgctagtgatgtgcctaaaaga
agaaaagtggtaaagacacgaattgatgagcgtggaagagaagtcactgaagttgtttgg
gagggtgaggagcaagatacaaaatctaacaataattcttcagccaaaattgctggcagt
aatacagtgagcaatgcaactaacaggcccccggttgctcgtaagtcgccagcagtaggg
aatgctgctccagcaaatcaacccgggaaagctggaaataaaaaggcagcagctaaggat
cctaagcaagggaatctcttctcatttttcaagaaggtttga
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