Salvia hispanica (chia): 125201730
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Entry
125201730 CDS
T09851
Name
(RefSeq) non-structural maintenance of chromosomes element 1 homolog
KO
K22817
non-structural maintenance of chromosomes element 1 [EC:
2.3.2.27
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125201730
03400 DNA repair and recombination proteins [BR:
shis03400
]
125201730
Enzymes [BR:
shis01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125201730
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Atypical E3
125201730
DNA repair and recombination proteins [BR:
shis03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
125201730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_Nse1
zf-RING-like
Baculo_IE-1
SLX1_C
zf-RING_16
TraG-D_C
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
125201730
NCBI-ProteinID:
XP_047955922
LinkDB
All DBs
Position
1:49743332..49746565
Genome browser
AA seq
322 aa
AA seq
DB search
MAPLSWRHHTLIQSLLSRGPLNEDDFFSIFSQLTVKNSGSRQQQERKLFNEFLRKINAEL
SFVQLELRACRNQYDGHVYYGVVNNVEDDQSKLGTKYTVPQIAFYKGIVEAIIHDAEGEG
CIFNTAALYIRLETQVHGANDSQSQGVASQIPPAFKNFSMAQKEKTLDQLVNDQWLCSMP
EGKIGIGVRSFLDLRSWFRTNEVPACEVCNEAAIKAQLCPNEACNVRLHSYCLQKKFSGQ
RVERVCSGCGTQLQGSTVKEELIEEISNANGSSQRRAESSRKRRRRPIQEASADIDTAGD
DSPPMSKPKRATRSSARLSAGE
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgctgagttggcggcaccataccctaatacagtcgctgctgtcgcgtggcccg
ctcaacgaagacgatttcttctctattttctcgcaactcactgtcaaaaattcagggtca
cggcagcaacaagagcggaaactgttcaatgagtttctcaggaagataaatgcagagttg
agctttgtgcagttggaactgcgagcatgccggaaccagtatgatggccatgtgtattac
ggcgttgtcaacaatgtcgaggatgaccagtccaagcttgggacaaagtacacagttcct
cagattgctttctacaaaggcattgttgaagctattatacacgatgctgaaggtgaaggc
tgcattttcaatacagctgctctatacataaggctagaaacacaggttcatggggcaaac
gattcccaatctcagggagttgctagccagatcccccctgcatttaagaatttctccatg
gcacaaaaggaaaaaactttagatcaactagtgaatgaccagtggctttgctcaatgcca
gaaggaaaaattggtattggagttagatcatttctagatctgcgtagttggtttcggact
aatgaggttcctgcatgtgaagtttgcaatgaggctgccatcaaggctcaactttgcccc
aatgaagcttgtaacgtccgacttcattcctactgtctgcaaaagaaattctctggacaa
agggtcgaaagagtttgctcgggttgtggcacgcagttgcaaggctcaacagttaaagaa
gagctcatagaagaaataagcaatgcaaatggttcttctcagagacgtgcagaatcttct
agaaagaggagacgtagaccaattcaggaagctagtgctgacattgacaccgcaggagat
gattctcctcctatgtcgaaaccaaaaagagcgactagaagctctgctcggctcagtgct
ggtgaatga
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