Salvia hispanica (chia): 125201783
Help
Entry
125201783 CDS
T09851
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
shis
Salvia hispanica (chia)
Pathway
shis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125201783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125201783
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
125201783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DDE_Tnp_4
Motif
Other DBs
NCBI-GeneID:
125201783
NCBI-ProteinID:
XP_047955988
LinkDB
All DBs
Position
1:complement(11772..14564)
Genome browser
AA seq
303 aa
AA seq
DB search
MAAASGTNDLSSEMELDAFRRLFPLCFHERHLLESIRPDGRPLGRARDTSLSLGAVASAN
GSALAKIGCTTMLAAIKLEVMTPTVEAPDEGCIAIDFHMPPICSPLIRPGRPAEVAPVIS
KQLSDTILSSGMIDLKELCLVSGKAAWMAYLDIYCLDADGALFDAALLSAVAAFSHLQIP
VVSLNDDGRIVLVSEENGGSMKEKEPVNKEKIKLKMNSQPFSLTCILHKNYILADPTSEE
ESIMETYLTVVLDTNYQLVSLNKPGGPGLASTSSIQDCIVLARKRVKELQQILSEAISDM
EVD
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgcgagtggaaccaatgatttatcttcagagatggagctggatgcttttcgg
cggctttttcctctatgttttcacgaacgacatctccttgaatctataaggcccgatggg
cgcccccttggaagagctagagacacttcgcttagtcttggagctgttgcatctgctaat
ggatcagctctagcaaagataggatgcactactatgttggctgccattaaattggaagtc
atgactccaactgtagaggcacctgatgaaggatgcatagccattgactttcacatgcct
ccgatttgttctccactaattcgccctggcaggcctgcagaggtggctccagtgatatct
aagcaattatctgacaccatcttgagttctggcatgattgatctgaaagagttatgcttg
gtcagcggcaaggctgcttggatggcctatctggacatatactgtttggatgcagatggc
gccctttttgatgcagcattgctttcagcggtggctgccttctcacatttgcaaattcct
gtagtctctctcaatgatgacgggagaatagttcttgtgtctgaggagaacggtggatca
atgaaggaaaaggaacctgtcaataaggaaaagataaagcttaagatgaacagtcagcct
ttctccttaacatgtattcttcacaagaactacattctagcagatccaacctctgaggaa
gagtccatcatggaaacttacctgacagttgtgctggatacgaattatcagcttgtgtct
ctcaataaaccaggtggaccaggtttagcaagcacatcatcgatccaggattgcatagta
ttagcacggaaacgagtgaaagaacttcagcagatcttgagtgaagcaatttctgatatg
gaagttgactga
DBGET
integrated database retrieval system
