Salvia hispanica (chia): 125201830
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Entry
125201830 CDS
T09851
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00040
Pentose and glucuronate interconversions
shis01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125201830
Enzymes [BR:
shis01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
125201830
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
125201830
NCBI-ProteinID:
XP_047956053
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Position
1:27207225..27209351
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AA seq
402 aa
AA seq
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MALSFFFLLFTFFLPSLIASSPTLKDPELVVQEVHRKLNASRRKLGFLSCNTGNPIDDCW
RCDSNWEKNRQKLADCAIGFGKNAIGGRDGKIYVVTESGGDDPVNPKPGTLRHAVIQDEP
LWIIFARDMVIQLKEELIMNSFKTIDGRGASVHIANGPCITIQGVTNIIIHGIHIHDCKQ
GGNAMVRDSPQHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCKDGLIDAIHGSTAITISN
NYMTHHDKVMLLGHSDSYTQDKGMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE
MYAIGGSADPTINSQGNRFLAPNDRFSKEVTKHEDAPERQWKSWNWRSEGDLMLNGAYFT
PSGAGASSSYAKASSLGARPSSLVSSITAGAGSLNCRKGSHC
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcactatcattctttttcctcttgttcacattcttcctcccatctctcattgcctca
tctccaacactcaaagaccctgagctagtagtccaagaggtccataggaaattgaatgcc
tcgaggaggaaattggggttcctgtcctgcaacactgggaaccccatcgacgactgctgg
cggtgcgactccaactgggagaaaaaccgccagaagttggccgattgcgcgatcggattc
ggcaagaatgccatcgggggccgggacggaaaaatctacgttgtgacagaatccgggggc
gacgaccctgtgaacccgaagcccgggacgctccggcacgcggtcatccaggacgagccg
ctatggatcatattcgcgcgcgacatggtcatccaattgaaggaggagttgatcatgaac
tctttcaagaccattgatggtaggggcgctagtgtgcacattgccaatggtccatgcatc
accatccaaggtgtgaccaacatcatcatacatggcatccacatacatgattgcaagcaa
ggcgggaatgctatggtgcgtgactccccacagcactacgggtggaggaccatatccgac
ggcgacggcgtgtccatctttggcgggagccacgtgtgggttgatcattgctcactctcc
aactgcaaagatggcttgattgatgccatccatgggtccaccgccatcaccatatcaaac
aattacatgacccatcatgataaagtcatgcttttggggcatagtgactcatacacacaa
gataaagggatgcaagtcaccattgccttcaatcactttggggaagggctagttcaaaga
atgccgagatgtagacacggatacttccatgtggtcaacaatgactatacacattgggag
atgtatgccattggtgggagtgcggatcccacaattaacagccaaggcaatagatttctt
gcaccaaatgatagattcagcaaagaggtgaccaaacacgaggacgcgcccgaacgtcag
tggaagagttggaattggagatcggaaggggatctaatgttgaacggtgcgtatttcacg
ccgtcgggggctggggcatcgtcgagctatgctaaagcgtcgagccttggcgcccgaccg
tcgagcctagtcagctcgatcacggctggagccggtagcctgaattgtcggaaggggtcg
cattgttga
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