Salvia hispanica (chia): 125201993
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Entry
125201993 CDS
T09851
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
shis
Salvia hispanica (chia)
Pathway
shis04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
125201993
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shis04040
]
125201993
Ion channels [BR:
shis04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
125201993
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
125201993
NCBI-ProteinID:
XP_047956260
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Position
1:complement(40969448..40972541)
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AA seq
686 aa
AA seq
DB search
MNLRGEKYVRFNENSDRNSKRKLFGLSKPSLSSITSGIRRGIDTSRERFGSIKAGISRGF
VQSLPSGKKRRILDPQGNFLQRWNKIFVLSCIIAVSLDPLFFYIPVITRDQFCLSLDRKI
EITACILRSLVDILYIFHILLRFRTGFIAPSSRVFGRGELVEDSKQIAKRYLCSYFIVDI
LSILPLPQVVILMVTHIVNGPVSRVTKEMLKAVIFFQYIPRIWRIYPLYQEVTRTSGIFT
ETAWAGAAFNLVLYMLASHVLGAFWYLFAVERRESCWSDVCGKSSGCNVDRLYCFGINGV
NNMEFLNSSCPLREQNELNSSEFDFGIALDALQAGVAEHDYFWRKFFFCFWWGLRNLSSL
GQNLKTSTFVGEIMFAIAISVIGLILFSLLIGNMQKYLQSITTRVEEMRVKRRDAEQWMS
HRMLPEHLRDRVRRYEQYIWQENRGVQEDSLIRNLPNDLRRDIKRHLCWTLLTRVPMFDK
MDEQLLDALCSRLKPVLYTADSIIIREGDPVDEMLFIMRGNILTVTTNGGRTGFFNAVGL
MAGDFCGEELLTWALDPNSSSSLPISTRTVRAVKDVEAFCLMPDDLKSVASQFRRLHSKQ
LQHTFRFYSQQWKTWGACFIQAAWRRHCRRKMERAVKDAMVHAPSLAATIYASRFATNMI
GNLRRAHHVPSPTLLPQKPSEPDFTS
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcaggggagagaaatatgtcagattcaatgaaaactccgacagaaactcgaaa
cgaaagctatttggattgagcaagccaagcttgagctcaatcacaagtggaataagaaga
ggaatcgacacaagtcgtgagaggtttggctcaatcaaagctggaataagccgaggattt
gttcaaagtttgccaagtgggaagaagaggagaattctggatccgcaagggaattttctg
cagagatggaataagatattcgtgctgtcctgcatcattgctgtctccctcgatcctctc
ttcttctacattcctgtcatcacccgcgaccaattttgtctgtctctggataggaagatt
gagataactgcttgcattcttcgttcgttagtagatatcttgtacatatttcacattctt
ctgcggttccggactgggttcattgccccctcctcccgcgtgtttgggaggggtgagctg
gtggaggactcgaaacagattgcaaagcgctacctctgctcctacttcattgtagacatc
ctgtcgattcttcctctgccgcaggtggtgattctgatggtgacccacatcgtcaacggc
cctgtttcgcgcgtcaccaaggagatgctcaaggccgttatcttcttccagtacattcct
agaatatggcggatatatcctttgtatcaagaagttactagaacttccggcatctttact
gagactgcgtgggcaggagctgctttcaacctcgtcctctatatgcttgctagccatgtg
ctaggcgcgttttggtatctgtttgcagtggagcgcagggagtcgtgttggagcgatgta
tgtgggaagagcagtggttgcaatgtggatcgtttatactgttttggcataaatggtgtc
aataacatggagtttctaaactcatcctgcccgctacgggagcaaaatgagttaaattct
agcgaattcgattttgggatagcactggatgctcttcaggcaggcgtagctgaacatgac
tacttctggaggaaatttttcttctgcttttggtgggggctgcgcaatttgagttcattg
gggcagaacctgaaaaccagcacgtttgtgggggagattatgtttgcgattgctatttca
gtcatcggcctcattctgttttccttgcttatcggcaacatgcagaagtatctgcagtca
atcactactagggtggaggagatgagagtgaaacgccgcgacgcagagcaatggatgtca
caccgcatgctccctgagcaccttcgagatcgcgtgaggcgctatgagcagtacatatgg
caggaaaacagaggcgtccaggaagactcgttgatccgcaacctccccaatgacttgaga
agggacatcaagcgccacctctgctggactttgctcacaagggtgcccatgttcgacaaa
atggacgagcagcttctagacgctctgtgctcccgcttaaagccggtgctctacaccgcg
gacagcatcataatccgggagggagatccagtggatgagatgcttttcataatgagggga
aatatattgacagtgaccacaaacggagggaggacagggttcttcaatgcagtgggccta
atggcgggagatttctgtggggaggagctcctgacgtgggcgctggaccccaactcctcg
tccagccttcccatctcaacaaggacagttcgagctgtgaaggacgtggaggcgttctgc
ctgatgcccgatgacttgaagagcgtggcgtcgcagttcaggcgtctccacagcaaacag
ctgcagcataccttcagattctactcgcagcagtggaagacttggggggcgtgcttcata
caggccgcatggcgaaggcattgtaggagaaagatggagagggcggtcaaggatgcaatg
gtgcatgcgcccagtttggcagccaccatttatgcttccagatttgctacaaacatgata
gggaatttgaggcgtgcccatcatgtgccttccccaaccttactgcctcagaaaccatct
gaacctgatttcacttcctaa
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