Salvia hispanica (chia): 125202097
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Entry
125202097 CDS
T09851
Name
(RefSeq) recQ-mediated genome instability protein 1 isoform X1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
shis
Salvia hispanica (chia)
Pathway
shis03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
125202097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shis03400
]
125202097
DNA repair and recombination proteins [BR:
shis03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
125202097
FA (Fanconi anemia) pathway
125202097
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
Motif
Other DBs
NCBI-GeneID:
125202097
NCBI-ProteinID:
XP_047956394
LinkDB
All DBs
Position
1:complement(28221587..28225790)
Genome browser
AA seq
664 aa
AA seq
DB search
MNRRRLLVVSSSDEDDDDNLRPPPPPQQHWLDEDDLIADDIDSDFQTVTLNSANPTPGSN
NSFTAPPTATHTQGNHRFEPIPLDISDEDPEDVSTGGDNAFPQATNANHGHFQVSESPAV
DGVLKRLGLSVRGEWLDSCLQGLQASTPGFQRMDDSSKAKLCFKQFLWSDMNFCGAGVLP
PNVHTLHLVDLKGPFVLQVDEAVNISNPVRGRYQNAAPGIKRCLKLSMTDGIQRVFGMEY
RPIKDLQVLGPAGLKVVVCNVHVRRGLLMLVPEVIEVLGGAVDELEAARQRLVEEVNKPP
RGRRNRTGEVVPLTTRATLAAWPPSNDAVPGHVDNNRPTNVIPQQTSRQGYAASVPTNDV
HRQDFATPINRNDAVANTSHTPWPPEQDEIQGHTDPPITTHSRQGPDRRGQDTEVPVYQS
NPQPSTVPALQRAQSVATAQHINEPSSEVLTPLGGTRQGTPASYMPEEDVHAPVSMDDDE
ANTSSIHMDVDDISTVDNPEPHFILSGDKEPPFIYLASLSAKYAAIDDETSVVRGKIKCI
ITGVKGFQFKGRSTFELRVYIDDGSLISEILIDHNVVRNAIGYSTQEVSKAYEFPEIKQI
KEAAKEFQKFLANFEGTLLVEMRRESPVPVAVEMDQGCPTSDARLLLGRVKSLTSTPVPL
NPKP
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaaggcgcctccttgtagtctcctcctccgacgaagacgacgatgataacctc
cgccctcctcctccgcctcaacagcactggttagacgaagacgacctcatcgccgatgac
atcgactccgatttccaaacagttacactgaactccgcaaatcctactcccggcagcaac
aattccttcaccgcaccccccaccgccactcacacacaaggaaaccaccgattcgagccg
attccacttgatatctccgacgaagatccggaagatgtttctaccggcggtgacaatgcc
ttccctcaagccacgaacgctaatcacggtcattttcaagtgtcggagtcgccggcggtg
gatggggttttgaagaggctagggctcagtgttaggggagagtggctggattcgtgttta
caaggtttgcaggcatccactccggggtttcagagaatggacgattcatcgaaggctaag
ctttgctttaagcagtttttgtggtcggacatgaatttctgcggcgcaggggtgcttccg
ccgaatgtgcacaccttgcatttggttgatctcaaggggccttttgttcttcaggtggat
gaggcagtaaacataagcaaccctgttcgcgggaggtaccaaaacgctgctccgggaatc
aagagatgccttaaactgtccatgacagacggaatccaacgtgtgtttggcatggaatat
cgacccatcaaagatcttcaagttttggggccggcaggactgaaggtagttgtttgtaat
gtacatgttaggcgtgggctcttgatgctagtccctgaagttattgaggtgttgggagga
gccgtagatgagttggaagctgcacgacagaggcttgttgaagaagtaaataagccacct
cggggaagaagaaataggacaggggaggttgttcctctgacaactagggcaacacttgct
gcatggcctcctagtaatgatgcagttccagggcatgtagataataaccgcccaacgaat
gtaattccccagcaaacaagcaggcaaggatatgcagctagtgtacctaccaatgatgtg
cacagacaagactttgctactccaattaatagaaatgatgctgtggccaacacttcacat
acaccctggccacctgaacaagatgaaattcaagggcatactgatcctcctataactacc
cattcacgacaaggccctgacagacgcggacaagacactgaagttcctgtgtatcaaagt
aatcctcagcctagtaccgtgcctgcactgcagcgtgcacaatctgtcgccactgctcag
catattaatgaaccctcatcagaagttttgacacctttaggagggactaggcaaggcacc
cctgccagttatatgcctgaggaggatgttcatgcacctgtcagcatggatgatgacgag
gctaacacatcttccatacacatggatgttgatgatatatctactgtggataatccggaa
ccgcattttatactttctggagataaagaaccccctttcatatatttggctagtttatca
gcaaagtatgcggctattgatgatgaaacatctgttgttcgaggaaaaataaagtgtata
ataactggtgtcaagggatttcaattcaaaggaaggtctacctttgaacttcgtgtttat
atcgacgatggcagtcttatctctgagatcctcatcgaccacaatgttgtacgaaatgca
attggttattctactcaggaggtttcaaaggcctatgagtttccggaaatcaaacagatc
aaggaggcagcaaaagaatttcaaaaatttctagctaattttgaggggacattgcttgta
gagatgcgcagagagtctcccgtcccagttgccgtggagatggaccagggctgtcctacc
tctgatgctcggttgcttcttgggagggtcaagtcgctcacttctacccctgtcccccta
aaccctaaaccctaa
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