KEGG   Salvia hispanica (chia): 125202231
Entry
125202231         CDS       T09851                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
shis  Salvia hispanica (chia)
Pathway
shis03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125202231
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:shis03041]
    125202231
Spliceosome [BR:shis03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    125202231
 Complex B
    125202231
 Complex C
   U2 SnRNP specific factors
    125202231
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin MBDa
Other DBs
NCBI-GeneID: 125202231
NCBI-ProteinID: XP_047956552
LinkDB
Position
1:complement(16837375..16840573)
AA seq 810 aa
MLGSLPILPLPAPPEDGDLGPLPASQVTEESDDEKNLENEDQKMAIDKPSAPPSVATHTR
SIGIIHPPIDIRNIVDKTAQFVAKNGPEFEKRIIAHNEGNAKFNFLRASDPYHAYYQHRL
AESRAQNQNAAAQPPQPEPAPESVSSTPAADASDASAKPDPSAQFRTVRKVLDPPEAEQY
TVRLPEGITGEELDIIKLTAQFVARNGKSFLTGLTSRESTNPQFHFLRPTHSMFMFFTSL
ADAYSKVLMPPKGLSDKLKNSVLDMTTVLERCLNRLEWERSQEQARQKAEDEIEQERLQM
AMIDWHDFVVVESIDFADEEDEDLPAPMTLEEVIRRSKMSAMEEEDFVEPGKEVEMEMDE
EEVQLVEEGMRAANLEENGDVKRNEVKVLLEENEPPMRIVKNWKRPEDRIPAERDPTKYV
VSPITGELIPISEMSEHMRISLIDPKFKEQKDRMFAKIRETTLAADDEISRNIVGLARTR
PDIFGTTAEEVSNAVKAEIEKKKDEQPKQVMWDGHTGSIGRTASLALSQNTDMEDMGDGL
NNDGRSLQGPAPPPRPGMLSIRPLPPPPGLALNIPRPPTMVQYPNPTGAGGVAPPPPGPP
VVNVIPSIRPPPPSMPMMHGQNLMGNRPPMPPSMPLNSHNPVPPPPGSQFTPLGGPRFQP
GMPMPQPGMSMVPPPPMPLGMPPPPPPEEAPPPLPEEPEPKRQRLDDSFLIPEEQFLAKH
PGTARISISVPNTDEGNLKGQILEIAVQSLTETVASLKEKIAGEIQLPSNKQKLSGKAGF
LKDNLSLAYYNIGPGEALSLSLRERGGRKR
NT seq 2433 nt   +upstreamnt  +downstreamnt
atgctgggttcattgccaatattgccccttccggcaccgcctgaagacggcgatctcggc
ccgttgcccgcttctcaggtgactgaggaatctgatgatgagaaaaatttggagaatgaa
gaccagaagatggccattgataagcccagtgctccaccatcagtagcaacacacactagg
tcgataggaattatacacccgcctatagacattagaaatattgtagacaaaactgctcaa
tttgtggcaaaaaatggaccggagtttgagaaaagaattattgcacacaatgaagggaat
gcgaaattcaactttttacgcgcttctgatccttaccatgcttattatcagcaccggtta
gctgaatctcgagcacagaatcagaatgctgctgcacagcctcctcagccggagcctgcc
cctgaatcagttagtagtactccagcggctgatgcaagtgatgcctcggctaagcctgac
ccttctgcccaattccgaactgtacgtaaggttcttgacccaccagaggcagagcaatat
actgtccggctacctgaagggattacaggggaggaattggatataattaagctcacggct
cagtttgtggcgagaaacgggaagtcttttttgactggtttgactagcagagagagcacc
aatcctcagtttcattttctaaggccaacacacagtatgtttatgttctttacatctctt
gctgatgcttattcgaaagtcttaatgcctcctaaagggctgtcagataagctaaaaaat
agcgtccttgatatgactactgtcctggaacgctgcttaaatcgccttgaatgggaacgg
tcgcaagagcaggctaggcaaaaagctgaagatgagatagagcaggagcgactgcagatg
gctatgattgactggcatgactttgttgtggttgagtcaatagactttgctgatgaagag
gatgaggacttacctgctccaatgacacttgaggaagtgataagaagaagcaagatgtca
gctatggaggaagaagatttcgttgagcctggcaaggaggtagaaatggaaatggatgaa
gaagaggtccaactggttgaggagggcatgagggcagcaaatctggaggagaatggagat
gtgaagaggaatgaggtcaaggttttgctagaagagaacgaaccacccatgcgaattgtg
aaaaattggaagaggcccgaggacagaatcccagctgaaagggatcctactaaatatgtc
gtctctccgataactggcgagctaattcctattagtgagatgtccgaacacatgagaatc
tctcttattgatcccaagtttaaggaacagaaggataggatgtttgctaagataagagag
accacccttgctgcggacgatgagatatctaggaatattgtaggacttgcgagaacacgg
cctgatatttttggtacaaccgcagaagaagtttctaatgctgtgaaggctgaaattgag
aagaagaaagatgagcaaccaaaacaggtcatgtgggatggtcatactggaagcattggc
cgcacagccagcctggccttgtctcagaatactgatatggaggacatgggtgatggttta
aacaatgacggcaggagccttcagggtccagctcctcctcctaggcctggtatgctatca
atcaggccactacctccacctcctggtcttgcgttaaacattcccaggccccccacaatg
gttcaatatccaaacccaaccggcgctggtggtgttgcaccacctccacccggcccccct
gtagtcaatgtaattccttctattcgccctccacctccttcaatgcctatgatgcacggg
caaaatcttatgggaaaccgtcctccaatgccgccatctatgcccttgaattctcataac
cctgttccaccaccacctggatcgcagtttacacctttgggaggtcccagattccaacca
ggcatgcctatgccccaaccaggcatgtctatggttcctccacctcctatgcccttaggc
atgcctccaccaccaccacctgaagaggcccctccaccccttcctgaagaaccagagccc
aagaggcaaaggcttgacgactcgtttctcattccggaagaacagttccttgcaaaacat
ccgggtactgctcgtattagtatatcagtgcctaacactgatgaaggaaacctgaaagga
caaattttggagattgccgtgcagtccttgactgaaacagttgcaagtttgaaagagaaa
attgctggggagatacagcttccttcaaataaacagaagctgagtgggaaggcagggttc
ctcaaggacaatttatctcttgcctattataatattggacctggagaggcactatctctt
tctcttagagaacgtggtggcaggaagagatga

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