Salvia hispanica (chia): 125202243
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Entry
125202243 CDS
T09851
Name
(RefSeq) serine/arginine-rich splicing factor RS41-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
shis
Salvia hispanica (chia)
Pathway
shis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125202243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shis03041
]
125202243
Spliceosome [BR:
shis03041
]
Common components
Common spliceosomal components
SR proteins
125202243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_5
RNA_bind
DUF2129
Cucumo_2B
RRM_Nup35
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
125202243
NCBI-ProteinID:
XP_047956561
LinkDB
All DBs
Position
1:complement(48196958..48199386)
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AA seq
256 aa
AA seq
DB search
MKPIFCGNLDFDAKQSDVDRLFRKYGRVDRVDMKSGFCFVYMEDERDAEDAIRRLDRIEF
GKKGRRIRVEWTKQERGSRRPDSTRKSSSSARPSKTLFVINFDPINTRTRDIEKYFEHYG
KISNVRIRRNFAFVQYELQEDATRALEETHLSKFMDRVISVEYAIRDDDDKRNGHSPDGR
GRDTSPDRRNYDRRRSPSPYQRDRGSPDYGHGSVPNSRSERRGSPQYGRAESPANDRYNS
RSPPPARERSRSRSRS
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctatattttgcgggaatctggactttgacgctaagcaatccgacgttgatcgc
cttttcagaaaatatgggagggtggatcgcgtagatatgaaatctggcttctgcttcgtc
tatatggaagatgagcgggacgcagaggatgcgatccggaggcttgacaggatagagttt
ggcaagaaagggcgcagaattcgtgttgagtggaccaagcaagagcgtggtagcagaagg
cctgatagcaccagaaaatcttcttccagtgcacgaccttctaaaacgttatttgttatt
aactttgatcctatcaatactaggaccagggacattgaaaagtattttgagcattatggg
aagatatccaatgtcaggatcagaaggaactttgcgtttgtgcagtatgagctgcaggaa
gatgcaacccgagcattagaggagactcacctaagcaagttcatggatcgagttatatca
gtggaatatgcaatccgggacgatgatgacaaaagaaatgggcacagccctgatggaaga
ggacgtgacacgtctcctgatagaagaaactatgatcgcagacgttccccaagtccctat
caaagagataggggtagccctgactatggacatggatctgtaccaaattctagatcagaa
cggaggggcagtcctcaatatggaagagcagaaagccctgccaatgacagatacaacagt
cgttcacccccgcctgcacgtgagaggtctcgatcacgatctcggtcttga
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