Salvia hispanica (chia): 125202285
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Entry
125202285 CDS
T09851
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta-like
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
shis
Salvia hispanica (chia)
Pathway
shis03015
mRNA surveillance pathway
shis04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125202285
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125202285
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
shis01009
]
125202285
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125202285
03036 Chromosome and associated proteins [BR:
shis03036
]
125202285
Protein phosphatases and associated proteins [BR:
shis01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
125202285
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
125202285
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
125202285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_8
EF-hand_1
EF-hand_5
P2R3B_EF-hand
Phage_Inh_C
DUF4187
Motif
Other DBs
NCBI-GeneID:
125202285
NCBI-ProteinID:
XP_047956619
LinkDB
All DBs
Position
1:23752409..23759189
Genome browser
AA seq
538 aa
AA seq
DB search
MDLDFNGDVTSLDAELLQLQEVSPLAIKANPYVAEKLFDQWLSLPETNSLVKSLLSNAKG
GGPLNAAGTGSTNTAASNTLPSMFPAGSTPPLSPRSSSGSPRILKHRAGPSSFPSPLKLV
NEPVKELIPQFYFQNGRPPPNELKERCLFRINQFFYGHVDGLQMHEFKPVTKELCKLPSF
FSAVLFRKIDTEGTGIVTRDAFVDYWINKNMLSKDLATQLYTILKQPEHRHLVQDDFKPV
LRELLTTHPGLEFLQSTPEFQERYAETVIYRIFYYVNRAGNSRLTLKELRRSNLIAAMQH
ADEEEDINKVLRYFSYEHFYVIYCKFWELDSDHDFLIDKENLIRYGNHALTYRIVDRIFS
QVPRKFTSKVEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGIITRNEMQFFYE
EQLHRMECMAQEPVLFEDILCQIVDMVHPEEESYFTLRDIKGSRLSGSVFNILFNLNKFM
AFETRDPFLIRQERENPNLTEWDRFAHREYIRLSMEEDAEDASNGSGDVWDEPFEAPF
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggatttggatttcaatggcgatgtcacgagcctcgatgctgaactgctgcagcttcag
gaggtgtcgccgctggctattaaagccaacccgtatgttgccgagaagctgtttgatcag
tggctttcgcttccggaaaccaattccttggtcaaatcgttgctcagtaatgccaaggga
ggtggccccttgaatgctgctggaacaggtagcacaaatactgcagctagcaatacgctg
ccttcaatgtttcctgcaggtagtacgccaccactttcaccaaggagttcttcaggttct
cctcgaatcttgaaacacagggcaggcccttccagttttccctctcccttgaaattagtg
aatgaacccgtgaaagaacttatacctcagttctatttccaaaatgggcgcccaccacct
aatgaattgaaagagcgatgcttgtttagaattaaccaatttttttatggtcacgtggat
ggactgcagatgcatgaatttaaaccagtaacgaaggaactttgcaagctcccgtctttc
ttttctgctgtactgtttagaaagatcgacaccgagggaactggaattgtgaccagggat
gcgtttgtcgattattggattaataaaaacatgttgtccaaggatctagcaacacagtta
tacacaatcttgaagcagccagagcacagacacttggtgcaggatgactttaaacccgtt
cttcgagaacttttgaccactcatcctgggttggaattcctacagagtacacctgaattt
caagaaagatatgctgaaactgtaatatacagaatattttactatgtgaatagagctggt
aatagtcgtcttacactgaaggagctgagacgctcaaacttgattgctgcaatgcagcat
gcagatgaggaagaggatattaacaaagtcttgaggtacttctcctatgagcatttctat
gtgatatactgcaagttctgggagctggactcagatcatgattttttgattgacaaagaa
aacctcatcagatatggtaaccatgcacttacctacaggattgttgataggatattttct
caggttccgagaaagttcaccagtaaggttgaaggaaagatgggatatgaagatttcgtc
tacttcatattgtcagaggaggataaatcatcagaacctagtcttgagtattggttcaag
tgcatagatttggatggtaatggcattataacgaggaatgaaatgcaattcttttatgag
gagcagttgcatagaatggaatgcatggcccaagagcctgtactttttgaagatatacta
tgtcaaattgttgacatggttcatccagaggaagagagctattttacgttgcgggatata
aaaggaagcagactttctggcagtgttttcaatatcctgtttaaccttaataagttcatg
gctttcgagactcgtgatccatttctaattcgccaggagcgtgagaaccctaatttgacg
gagtgggatcgctttgctcaccgagaatacattaggctctcgatggaggaagatgcagaa
gatgcctctaatggaagtggagatgtttgggatgaaccgttcgaggctcctttttga
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