Salvia hispanica (chia): 125202389
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Entry
125202389 CDS
T09851
Name
(RefSeq) LOW QUALITY PROTEIN: rhamnogalacturonan I rhamnosyltransferase 1-like
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
shis01003
]
125202389
Enzymes [BR:
shis01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
125202389
Glycosyltransferases [BR:
shis01003
]
Polysaccharide
Structural polysaccharide
125202389
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
125202389
NCBI-ProteinID:
XP_047956736
LinkDB
All DBs
Position
1:28989302..28992262
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AA seq
509 aa
AA seq
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MRRIXGCEESDTRRVMMRHKTAAFGGERLRNNGLVSRSRMRLWMIRATTTVLLWTCVVQL
SALSETWGPRVFKGWPCFLHKPEPAFGLHSSPRLPLPPKRDYKNNGYLMVSCNGGLNQMR
AAICDMVAIARSLNVTLIVPELDKTSFWNDPSEFQDIFDVDHFITSLRDEVRILKELPPR
VKSRVELGIIHTMPPISWSDISYYHNQVLPLIQRYKVVHLNRTDARLANNGQPLEIQRLR
CRVNFSALRFTPQIEELGRKVIKILRRNGPFLVLHLRYEMDMLAFSGCTQGCNSEEVEEL
TSMRYAYPWWKEKVIDSDFKRKEGLCPLTPEETALVLRALDVDPTIQIYIAAGEIYGGKR
RLSTLTSSYPNLVRKETLLEPSDLMFFQNHSSQMAALDYLVSLESDIFVPTYDGNMAKVV
EGHRRYLGFKKTILVERRLLVDLIDRYSSGSLNWDEFSSAVKAAHADRMGKPRKRLVIPD
RPKEEDYFYANPWECLHTSLDDEEVVNSV
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagaatatagggctgtgaggagagtgatacaaggcgggtgatgatgaggcacaaa
acggcggcgtttggaggggagaggctgaggaataatgggttggtgtcacggtcgagaatg
aggctatggatgatcagagcaaccaccactgttttgctgtggacttgtgtagttcagttg
tctgcattgagtgaaacttgggggcctcgcgtcttcaaaggctggccttgcttcttgcac
aaacccgagcctgcattcggccttcattcctcgccccgtctccctcttcccccgaagagg
gactataaaaacaatggttacttaatggtttcgtgcaatggagggcttaatcaaatgagg
gctgcaatatgtgacatggttgctattgctaggtctttgaatgttacgttgatagttcct
gaacttgataagacttcgttttggaatgatccgagtgaatttcaagacatatttgatgtc
gatcacttcattacttcactgagagatgaagttcggatactcaaggagctacctccacgt
gtcaagagcagagtggagctcggaattattcatacaatgcccccgattagttggtctgat
atctcatactaccacaatcaggttctccctctcattcagagatataaagttgtccatttg
aataggacagatgctcgtttagcaaacaacggtcagcccttggagattcagaggctacgc
tgccgagtaaactttagtgctttaagatttacacctcaaatagaggaactaggcagaaaa
gtaatcaaaatactgaggcgcaatggccctttcttagtgcttcatctcagatatgagatg
gatatgctcgccttctccggttgcactcaagggtgcaactccgaggaggtggaagagcta
acgagcatgagatacgcttatccttggtggaaagagaaagtcatagactccgatttcaag
aggaaagaggggttgtgtccgttgacacccgaggaaactgcactcgtgttgagggcattg
gacgttgatcccaccatccagatttacattgctgctggggaaatatatggcggtaaacgt
agactgtcaacactaacatcttcgtacccaaatctcgttaggaaggagacgcttttggag
ccttcggaccttatgttcttccaaaatcactcctctcaaatggctgcattggattatctt
gtctcattggagagcgatatcttcgttcccacatatgatggcaacatggctaaagttgtc
gaaggccatcgcagatatcttggattcaagaaaacgatcctcgtggagaggaggctacta
gtcgacctaatagaccgttacagctcaggatcactaaattgggacgaattctctagcgcg
gtgaaggcagctcacgctgatcggatgggaaagccgagaaagagattggtgatacccgac
cggcctaaagaggaggattacttctatgccaacccttgggagtgtttacacacatcatta
gatgatgaggaagtggtaaatagtgtgtga
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