Salvia hispanica (chia): 125202478
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Entry
125202478 CDS
T09851
Name
(RefSeq) protein PIGMENT DEFECTIVE 338, chloroplastic
KO
K02945
small subunit ribosomal protein S1
Organism
shis
Salvia hispanica (chia)
Pathway
shis03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
125202478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
shis03011
]
125202478
Ribosome [BR:
shis03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
125202478
Bacteria
125202478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
RRP40_S1
S1_RRP4
HPS3_N
Motif
Other DBs
NCBI-GeneID:
125202478
NCBI-ProteinID:
XP_047956835
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All DBs
Position
1:complement(52576811..52580731)
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AA seq
495 aa
AA seq
DB search
MQLTHHSSCNNSSLFTNPSLSTAISPLSSFSRSNSTTNLKLPKLRRAHVPLCTKNGVFER
SKEAPFPKKAENDEELEELELLNKPSPKPVSDFEAVEEEEVKKVDADEILAPFYKLFRSP
EEEIDQIDREIEGEIEGKLGEFGVEYYEPKQGDFVVGVVVSGNENKLDVNVGADMLGIML
TKDVLPLYDKEMGDLLCDVEKDAEEFLVRGKMGILRNDEAMGGVALPGRPVVDVGTVLFA
EVLGRTLGGRPLLSCRKLFRRIAWHRVRQIMQLNEPILVKITEWNTGGLLTRLEGLRAFL
PKAELINRVNNYTELKENVGRRLYVQITRINENTNDLILSEKEAWAMMNLQEGTLLNGTV
KKIFPYGAQIRIGDTNRSGLLHISNISRGHTTSVSDYLAIDDEVKVLVIKSMFPGKISLS
IADLESEPGLFLSNKEKVLSEAEDMAKKYRRRMATVSTKRKIEALPVDGLPFGDEEKLYA
NWQWFRFERNNELNP
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgactcaccactcctcttgtaataactcatctctcttcaccaatccttctctc
tccaccgccatttccccgctctcctccttctcccgttcaaattccaccacaaatttaaaa
ttaccaaaactcagacgcgcccacgtccctctctgcactaaaaatggagtctttgagcga
tccaaggaagccccttttcccaaaaaggctgagaacgatgaagagctagaagagcttgag
ctgctcaacaagccctctccgaagccagtgagcgatttcgaggccgtggaagaggaagag
gtgaagaaggtcgatgctgatgagattttagcccctttctacaagctgtttaggtcacca
gaggaagaaattgatcaaattgatagggaaattgagggtgaaattgaggggaaattgggg
gaatttggtgtggagtattatgagcctaagcaaggggattttgtggtgggggtggtggtt
tctggcaatgagaataagcttgatgtgaatgtgggagcagatatgctggggataatgctg
acaaaggatgtgctgcctttgtatgataaggagatgggggatttgctgtgtgatgtggag
aaggatgctgaggagtttttggttcgtgggaagatggggattctgaggaacgacgaggcg
atgggcggtgtggctttgccggggaggcctgtggtggatgtggggactgttctgtttgct
gaggtcttggggaggacacttggtgggaggccgttgctttcgtgtaggaagctatttagg
cggattgcgtggcaccgagtgaggcagattatgcaactaaatgaaccgattctggttaaa
atcacggagtggaatactggcggcctccttacaagactggaggggctgagggcttttctt
ccaaaagccgaattgatcaacagagttaacaattacacagaacttaaagagaatgttgga
aggaggctctacgtgcagattactagaatcaatgaaaacaccaacgacttgatactcagc
gagaaggaggcttgggcgatgatgaatcttcaagagggaacacttctaaatggaacggtc
aagaagattttcccgtatggtgcacagataaggataggtgatacaaataggagtggattg
ctgcatatttcaaacatatctcgagggcataccacttctgtcagcgactatcttgcaatt
gacgacgaggttaaagttcttgttataaagtcaatgtttcctgggaaaatttctctgagc
attgctgatctcgaaagcgagcccggtctattcctgtcgaacaaggagaaagtattatcg
gaagctgaggatatggcgaagaagtacagacggaggatggcaaccgtctccaccaaaaga
aagatagaagccctccctgtggacggcctgccattcggagatgaagagaagctctatgct
aactggcaatggttcaggtttgagagaaacaacgagctcaacccgtga
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