Salvia hispanica (chia): 125202589
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Entry
125202589 CDS
T09851
Name
(RefSeq) U1 small nuclear ribonucleoprotein C-like
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
shis
Salvia hispanica (chia)
Pathway
shis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125202589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shis03041
]
125202589
Spliceosome [BR:
shis03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
125202589
Complex B
125202589
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-U1
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
125202589
NCBI-ProteinID:
XP_047956979
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Position
1:8701628..8705687
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AA seq
200 aa
AA seq
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MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANIRSYYQKFEEQQTQILIDQKIKEHLGQ
TVVYQQIGAAYNQHLAAFPGARPRLPVMPPPMFPGPPQMVPGMRPPMLPIPVPGAPGYGN
SPMVPMQPQPAPSLPPQSSGLPPPPSTSAPSPVPGGGQPPSSSGAPPPNATQMYNVNPPG
TSAASAPAGGYSYPQYSQTG
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggtactactgtgattattgtgacacttacttgactcatgattctccttctgtc
agaaagcagcataattctggctacaaacataaggcaaacataagatcctactaccaaaag
tttgaggaacaacaaactcagattttgattgatcagaagatcaaggagcatcttgggcag
acagtagtatatcaacagattggcgcagcttataaccaacatcttgctgcttttcccgga
gcaaggccgcgcctacctgtcatgccgcctcctatgtttccgggacctcctcagatggtt
cctggtatgaggcctccaatgctgcctataccagttcctggtgctcctggttatggaaat
tctccaatggtcccaatgcagcctcagcctgctccttcgttgcctccacaatctagtggg
cttccacctccaccaagtacgagtgccccatcaccagttcctggaggaggccaacccccg
agctctagtggtgcgccaccacctaatgctactcaaatgtacaatgtgaatccacctgga
acttctgctgcttctgcacccgctggtggctattcttatccacagtactctcaaaccggt
taa
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