Salvia hispanica (chia): 125202742
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Entry
125202742 CDS
T09851
Name
(RefSeq) peroxisome biogenesis protein 12
KO
K13345
peroxin-12
Organism
shis
Salvia hispanica (chia)
Pathway
shis04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125202742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125202742
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
125202742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-RING_2
NinF
PRIMA1
Motif
Other DBs
NCBI-GeneID:
125202742
NCBI-ProteinID:
XP_047957144
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Position
1:complement(23773434..23777447)
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AA seq
392 aa
AA seq
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MLFQVGGQGTRPTFFEMSAAQQLPSSVRAALTYSLGVFALRRPFIHKILDYEDEFFALLM
LVLETHSLRTTDASFSESLYGLRRRGAKIKLKKSNLLTNSADEIRHTGLRKRQKVLSVVF
LVVLPYLKSKLQSTYNREREANLQASLWGDSDERFDGDFISGDNNSFGSRDVSNIEASAR
DRCIKRVRKIVGACYPWLHAGNEGLSFAYQLLYLLDATGFYSLGLHALGIHVCRATGQEL
MDTSSRISKIRSRERERLRGSPWLKALQGGLLTCAYAVLDYAQTGLIAAVFFFKMMEWWY
QSAEERMSAPTVYPPPPPPPPPKVAKEGIPLPPDRTLCPLCLQKRANPSVMAVSGFVFCY
TCVFKYTNQYKRCPVTLMPASVDQIRRLFHDV
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttcaggtgggagggcaaggtacgcggccgacattcttcgagatgtctgccgca
cagcagctgccgtcaagtgtacgcgccgccctcacttactcgctcggcgtatttgctctg
agaagacccttcattcataaaatcttggattatgaagacgagttttttgcgctgcttatg
ctagtccttgaaactcacagtttgcgcactacagatgcttctttttcggaatcattgtat
ggcttacggcgaaggggtgctaagattaaattgaaaaagagcaacttgcttacaaattcc
gccgatgagatccgtcacacgggcttgcgtaaacgtcaaaaagtgctttcagttgtattt
ctggttgttttaccgtatttgaagtcaaaactccaatccacctacaacagggaaagagaa
gctaatctgcaggcaagtctttggggagatagtgatgaaaggtttgatggtgactttatt
agtggagacaataattcctttgggtcaagggacgtctcaaatattgaagcatcagctaga
gatcgatgcatcaagagggtgaggaagattgttggtgcttgctacccttggctgcatgct
ggaaatgaaggattatcttttgcctatcagctattgtacttgttggacgccactgggttc
tactctctgggattacatgcacttggcattcatgtttgtcgagctactggtcaagagttg
atggatacatcttccagaatttcaaaaataagaagtcgtgaacgagagagactacgcggc
tccccttggctaaaggcactacaaggtgggttactcacctgtgcatatgctgttcttgac
tatgcccagactggtttgattgcagctgtatttttcttcaaaatgatggaatggtggtac
cagtcggctgaagaaagaatgtcagccccaaccgtatatcctcctcctccaccaccaccg
cctccaaaggttgcgaaagaggggattccactacctccagataggacactatgcccgtta
tgtttgcagaaacgtgcaaacccatcagtaatggccgtttcgggatttgtgttttgctat
acttgtgtattcaaatataccaatcagtacaaacgctgcccggtcacattgatgcccgcg
tcagtggatcaaatcaggaggctatttcatgatgtataa
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